NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_032166.1 RefSeqGene
- Range
-
5001..112082
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001042734.4 → NP_001036199.1 protein transport protein Sec24B isoform b
See identical proteins and their annotated locations for NP_001036199.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks two in-frame exons in the 5' and central coding region, and uses an alternate in-frame splice site in the central coding region, compared to variant 3. The encoded isoform (b) is shorter, compared to isoform c.
- Source sequence(s)
-
AC105314, BC040137, BC117135, H15283
- Consensus CDS
-
CCDS43260.1
- UniProtKB/TrEMBL
-
B4DTM6
- Related
- ENSP00000382051.2, ENST00000399100.6
- Conserved Domains (6) summary
-
- COG5028
Location:428 → 1224
- COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
- cd01479
Location:640 → 883
- Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
- pfam00626
Location:1105 → 1179
- Gelsolin; Gelsolin repeat
- pfam04810
Location:567 → 603
- zf-Sec23_Sec24; Sec23/Sec24 zinc finger
- pfam04815
Location:983 → 1078
- Sec23_helical; Sec23/Sec24 helical domain
- pfam08033
Location:884 → 968
- Sec23_BS; Sec23/Sec24 beta-sandwich domain
-
NM_001300813.3 → NP_001287742.1 protein transport protein Sec24B isoform c
See identical proteins and their annotated locations for NP_001287742.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (c).
- Source sequence(s)
-
AC105314, BC040137, BC143268, H15283
- Consensus CDS
-
CCDS75179.1
- UniProtKB/TrEMBL
-
B4DTM6
- Related
- ENSP00000428564.1, ENST00000504968.6
- Conserved Domains (5) summary
-
- cd01479
Location:705 → 948
- Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
- pfam00626
Location:1170 → 1244
- Gelsolin; Gelsolin repeat
- pfam04810
Location:632 → 668
- zf-Sec23_Sec24; Sec23/Sec24 zinc finger
- pfam04815
Location:1048 → 1143
- Sec23_helical; Sec23/Sec24 helical domain
- pfam08033
Location:949 → 1033
- Sec23_BS; Sec23/Sec24 beta-sandwich domain
-
NM_001318085.2 → NP_001305014.1 protein transport protein Sec24B isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an in-frame exon in the 5' coding region, compared to variant 3. The encoded isoform (d) is shorter, compared to isoform c.
- Source sequence(s)
-
AC105314, BC040137, BC143269, H15283
- UniProtKB/TrEMBL
-
B4DTM6
- Conserved Domains (5) summary
-
- cd01479
Location:674 → 917
- Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
- pfam00626
Location:1139 → 1213
- Gelsolin; Gelsolin repeat
- pfam04810
Location:601 → 637
- zf-Sec23_Sec24; Sec23/Sec24 zinc finger
- pfam04815
Location:1017 → 1112
- Sec23_helical; Sec23/Sec24 helical domain
- pfam08033
Location:918 → 1002
- Sec23_BS; Sec23/Sec24 beta-sandwich domain
-
NM_001318086.2 → NP_001305015.1 protein transport protein Sec24B isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks two in-frame exons in the 5' and central coding region, compared to variant 3. The encoded isoform (e) is shorter, compared to isoform c.
- Source sequence(s)
-
AC105314, AK300278, BC040137, BC143269, H15283
- UniProtKB/TrEMBL
-
B4DTM6
- Conserved Domains (5) summary
-
- cd01479
Location:639 → 882
- Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
- pfam00626
Location:1104 → 1178
- Gelsolin; Gelsolin repeat
- pfam04810
Location:566 → 602
- zf-Sec23_Sec24; Sec23/Sec24 zinc finger
- pfam04815
Location:982 → 1077
- Sec23_helical; Sec23/Sec24 helical domain
- pfam08033
Location:883 → 967
- Sec23_BS; Sec23/Sec24 beta-sandwich domain
-
NM_006323.5 → NP_006314.2 protein transport protein Sec24B isoform a
See identical proteins and their annotated locations for NP_006314.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) lacks an in-frame exon in the 5' coding region and uses an alternate in-frame splice site in the central coding region, compared to variant 3. The encoded isoform (a) is shorter, compared to isoform c.
- Source sequence(s)
-
AC105314, BC040137, BC143268, H15283
- Consensus CDS
-
CCDS47124.1
- UniProtKB/Swiss-Prot
- B7ZKM8, B7ZKN4, O95487, Q0VG08
- UniProtKB/TrEMBL
-
B4DTM6
- Related
- ENSP00000265175.4, ENST00000265175.5
- Conserved Domains (6) summary
-
- COG5028
Location:463 → 1259
- COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
- cd01479
Location:675 → 918
- Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
- pfam00626
Location:1140 → 1214
- Gelsolin; Gelsolin repeat
- pfam04810
Location:602 → 638
- zf-Sec23_Sec24; Sec23/Sec24 zinc finger
- pfam04815
Location:1018 → 1113
- Sec23_helical; Sec23/Sec24 helical domain
- pfam08033
Location:919 → 1003
- Sec23_BS; Sec23/Sec24 beta-sandwich domain