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    Mpz myelin protein zero [ Rattus norvegicus (Norway rat) ]

    Gene ID: 24564, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mpzprovided by RGD
    Official Full Name
    myelin protein zeroprovided by RGD
    Primary source
    RGD:3109
    See related
    EnsemblRapid:ENSRNOG00000003171 AllianceGenome:RGD:3109
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    P0; MPP
    Summary
    This gene is specifically expressed in Schwann cells of the peripheral nervous system and encodes a type I transmembrane glycoprotein that is a major structural protein of the peripheral myelin sheath. The encoded protein contains a large hydrophobic extracellular domain and a smaller basic intracellular domain, which are essential for the formation and stabilization of the multilamellar structure of the compact myelin. Mutations in the orthologous gene in human are associated with myelinating neuropathies. A recent study showed that two isoforms are produced from the same mRNA by use of alternative in-frame translation termination codons via a stop codon readthrough mechanism. [provided by RefSeq, Oct 2015]
    Expression
    Biased expression in Muscle (RPKM 933.3) and Lung (RPKM 72.7) See more
    Orthologs
    NEW
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    Genomic context

    See Mpz in Genome Data Viewer
    Location:
    13q24
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (86103290..86109156)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (83570811..83576680)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (89524204..89530070)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L29 pseudogene Neighboring gene cilia and flagella associated protein 126 Neighboring gene succinate dehydrogenase complex subunit C Neighboring gene Purkinje cell protein 4-like 1 Neighboring gene nuclear receptor subfamily 1, group I, member 3 Neighboring gene translocase of outer mitochondrial membrane 40 like

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in cell aggregation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell aggregation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cell aggregation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cell-cell adhesion via plasma-membrane adhesion molecules IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cell-cell adhesion via plasma-membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell-cell adhesion via plasma-membrane adhesion molecules ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cell-cell adhesion via plasma-membrane adhesion molecules ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within cell-cell junction maintenance ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in myelination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in myelination IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within myelination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in myelination ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in myelination ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in basolateral plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    myelin protein P0
    Names
    myelin peripheral protein
    myelin protein zero (Charcot-Marie-Tooth neuropathy 1B)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001314068.1NP_001300997.1  myelin protein P0 isoform L-MPZ precursor

      Status: REVIEWED

      Description
      Transcript Variant: This transcript (1) encodes two isoforms, which result from the use of alternative in-frame translation termination codons. The shorter isoform (MPZ, also known as P0) results from translation termination at the upstream UAG stop codon, while the longer isoform (L-MPZ) results from UAG stop codon readthrough to the downstream UGA termination codon. This RefSeq represents the longer, C-terminally extended isoform (L-MPZ). As the UAG stop codon has been reported to specify several alternative amino acids (glutamine, tyrosine and leucine), its location in the longer isoform is denoted by an 'X'.
      Source sequence(s)
      BC078859, CB608173
      Conserved Domains (3) summary
      cd05879
      Location:31146
      Ig_P0; Immunoglobulin (Ig)-like domain of Protein zero (P0)
      smart00410
      Location:36146
      IG_like; Immunoglobulin like
      pfam10570
      Location:184248
      Myelin-PO_C; Myelin-PO cytoplasmic C-term p65 binding region
    2. NM_017027.2NP_058723.2  myelin protein P0 isoform MPZ precursor

      Status: REVIEWED

      Description
      Transcript Variant: This transcript (1) encodes two isoforms, which result from the use of alternative in-frame translation termination codons. The shorter isoform (MPZ, also known as P0) results from translation termination at the upstream UAG stop codon, while the longer isoform (L-MPZ) results from UAG stop codon readthrough to the downstream UGA termination codon. This RefSeq represents the shorter isoform (MPZ).
      Source sequence(s)
      BC078859, CB608173
      UniProtKB/Swiss-Prot
      P06907
      UniProtKB/TrEMBL
      A0A8I6GLD0, A6JFU2
      Related
      ENSRNOP00000004279.4, ENSRNOT00000004279.7
      Conserved Domains (2) summary
      pfam10570
      Location:184248
      Myelin-PO_C; Myelin-PO cytoplasmic C-term p65 binding region
      cd05879
      Location:30146
      IgV_P0; Immunoglobulin (Ig)-like domain of protein zero (P0)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      86103290..86109156
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)