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    CNGA3 cyclic nucleotide gated channel subunit alpha 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707872, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CNGA3provided by VGNC
    Official Full Name
    cyclic nucleotide gated channel subunit alpha 3provided by VGNC
    Primary source
    VGNC:VGNC:71274
    See related
    Ensembl:ENSMMUG00000021187
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CNGA3 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (2088545..2174719)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (93584007..93612240)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 131 Neighboring gene U7 small nuclear RNA Neighboring gene von Willebrand factor A domain containing 3B Neighboring gene ATP synthase subunit beta, mitochondrial pseudogene Neighboring gene inositol polyphosphate-4-phosphatase type I A Neighboring gene unc-50 inner nuclear membrane RNA binding protein Neighboring gene protein C2orf64

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cGMP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables intracellularly cAMP-activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables intracellularly cGMP-activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monoatomic cation transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of intracellular cyclic nucleotide activated cation channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclic nucleotide-gated cation channel alpha-3
    Names
    cyclic nucleotide gated channel alpha 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      2088545..2174719
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001101944.4 → XP_001101944.2  cyclic nucleotide-gated cation channel alpha-3 isoform X1

      See identical proteins and their annotated locations for XP_001101944.2

      UniProtKB/TrEMBL
      F7HCR0
      Related
      ENSMMUP00000036262.2, ENSMMUT00000043253.3
      Conserved Domains (3) summary
      cd00038
      Location:482 → 598
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:168 → 410
      Ion_trans; Ion transport protein
      pfam16526
      Location:598 → 667
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels

    2. XM_015112928.2 → XP_014968414.2  cyclic nucleotide-gated cation channel alpha-3 isoform X2

      Conserved Domains (3) summary
      cd00038
      Location:355 → 471
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:41 → 283
      Ion_trans; Ion transport protein
      pfam16526
      Location:471 → 540
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels
    Nucleotide Protein
    Heading Accession and Version

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