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    LCT lactase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707761, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LCTprovided by VGNC
    Official Full Name
    lactaseprovided by VGNC
    Primary source
    VGNC:VGNC:74244
    See related
    Ensembl:ENSMMUG00000012250
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LCT in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (20938898..20994674, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (21284144..21339991, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene R3H domain containing 1 Neighboring gene microRNA mir-128a Neighboring gene uncharacterized LOC114671317 Neighboring gene UBX domain protein 4 Neighboring gene minichromosome maintenance complex component 6 Neighboring gene glycoprotein endo-alpha-1,2-mannosidase-like protein pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lactase-phlorizin hydrolase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      20938898..20994674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110009.2 → XP_014965495.1  lactase-phlorizin hydrolase

      UniProtKB/TrEMBL
      F6V0B1, G7NB02
      Related
      ENSMMUP00000016070.2, ENSMMUT00000017159.4
      Conserved Domains (2) summary
      pfam00232
      Location:899 → 1364
      Glyco_hydro_1; Glycosyl hydrolase family 1
      cl23725
      Location:84 → 224
      Glyco_hydro_1; Glycosyl hydrolase family 1
    Nucleotide Protein
    Heading Accession and Version

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