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    CHRD chordin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702281, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CHRDprovided by VGNC
    Official Full Name
    chordinprovided by VGNC
    Primary source
    VGNC:VGNC:71042
    See related
    Ensembl:ENSMMUG00000007528
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CHRD in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (89680271..89690303)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (108660604..108665759, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene chloride voltage-gated channel 2 Neighboring gene RNA polymerase II, I and III subunit H Neighboring gene thrombopoietin Neighboring gene long intergenic non-protein coding RNA 2054 Neighboring gene EPH receptor B3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chordin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      89680271..89690303
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843902.1 → XP_028699735.1  chordin isoform X1

      UniProtKB/TrEMBL
      G7MJ48
      Conserved Domains (3) summary
      smart00214
      Location:811 → 877
      VWC; von Willebrand factor (vWF) type C domain
      smart00754
      Location:561 → 673
      CHRD; A domain in the BMP inhibitor chordin and in microbial proteins
      cl17735
      Location:51 → 125
      VWC; von Willebrand factor type C domain

    2. XM_028843903.1 → XP_028699736.1  chordin isoform X2

      UniProtKB/TrEMBL
      G7MJ48
      Conserved Domains (3) summary
      smart00214
      Location:811 → 877
      VWC; von Willebrand factor (vWF) type C domain
      smart00754
      Location:561 → 673
      CHRD; A domain in the BMP inhibitor chordin and in microbial proteins
      cl17735
      Location:51 → 125
      VWC; von Willebrand factor type C domain

    3. XM_028843906.1 → XP_028699739.1  chordin isoform X5

      UniProtKB/TrEMBL
      F6QCB5
      Related
      ENSMMUP00000009881.4, ENSMMUT00000010531.4
      Conserved Domains (3) summary
      smart00214
      Location:723 → 789
      VWC; von Willebrand factor (vWF) type C domain
      smart00754
      Location:561 → 671
      CHRD; A domain in the BMP inhibitor chordin and in microbial proteins
      cl17735
      Location:51 → 125
      VWC; von Willebrand factor type C domain

    4. XM_028843904.1 → XP_028699737.1  chordin isoform X3

      UniProtKB/TrEMBL
      F6QC94, G7MJ48
      Related
      ENSMMUP00000009883.4, ENSMMUT00000010533.4
      Conserved Domains (3) summary
      smart00214
      Location:784 → 850
      VWC; von Willebrand factor (vWF) type C domain
      smart00754
      Location:534 → 646
      CHRD; A domain in the BMP inhibitor chordin and in microbial proteins
      cl17735
      Location:51 → 125
      VWC; von Willebrand factor type C domain

    5. XM_028843905.1 → XP_028699738.1  chordin isoform X4

      UniProtKB/TrEMBL
      G7MJ48
      Conserved Domains (3) summary
      smart00214
      Location:784 → 850
      VWC; von Willebrand factor (vWF) type C domain
      smart00754
      Location:534 → 646
      CHRD; A domain in the BMP inhibitor chordin and in microbial proteins
      cl17735
      Location:51 → 125
      VWC; von Willebrand factor type C domain

    RNA

    1. XR_003727222.1 RNA Sequence

      Related
      ENSMMUT00000107240.1

    2. XR_003727223.1 RNA Sequence

    3. XR_003727224.1 RNA Sequence

    4. XR_003727226.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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