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    HPS3 HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712282, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HPS3provided by VGNC
    Official Full Name
    HPS3 biogenesis of lysosomal organelles complex 2 subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:73393
    See related
    Ensembl:ENSMMUG00000005528
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HPS3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (51253476..51297996)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (135761994..135806751)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene glycogenin 1 Neighboring gene helicase like transcription factor Neighboring gene non-histone chromosomal protein HMG-17 pseudogene Neighboring gene ceruloplasmin Neighboring gene ceruloplasmin and hephaestin like 1 Neighboring gene transmembrane 4 L six family member 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in organelle organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Hermansky-Pudlak syndrome 3 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      51253476..51297996
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131786.2 → XP_014987272.1  Hermansky-Pudlak syndrome 3 protein isoform X1

      UniProtKB/TrEMBL
      A0A5F8AHM9, G7MJJ4
      Related
      ENSMMUP00000076489.1, ENSMMUT00000100078.1
      Conserved Domains (3) summary
      pfam14761
      Location:3 → 212
      HPS3_N; Hermansky-Pudlak syndrome 3
      pfam14762
      Location:256 → 639
      HPS3_Mid; Hermansky-Pudlak syndrome 3, middle region
      pfam14763
      Location:653 → 1002
      HPS3_C; Hermansky-Pudlak syndrome 3, C-terminal

    2. XM_028843770.1 → XP_028699603.1  Hermansky-Pudlak syndrome 3 protein isoform X2

      UniProtKB/TrEMBL
      A0A5F8AKT8, G7MJJ4
      Related
      ENSMMUP00000077654.1, ENSMMUT00000092257.1
      Conserved Domains (3) summary
      pfam14761
      Location:3 → 212
      HPS3_N; Hermansky-Pudlak syndrome 3
      pfam14762
      Location:256 → 550
      HPS3_Mid; Hermansky-Pudlak syndrome 3, middle region
      pfam14763
      Location:565 → 914
      HPS3_C; Hermansky-Pudlak syndrome 3, C-terminal

    RNA

    1. XR_001443142.2 RNA Sequence

    2. XR_001443144.2 RNA Sequence

    3. XR_003727151.1 RNA Sequence

    4. XR_003727152.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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