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    ARID4A AT-rich interaction domain 4A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702688, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARID4Aprovided by VGNC
    Official Full Name
    AT-rich interaction domain 4Aprovided by VGNC
    Primary source
    VGNC:VGNC:70034
    See related
    Ensembl:ENSMMUG00000003514
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ARID4A in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (120392731..120468836)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (120274016..120350172)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit alpha 3 Neighboring gene high mobility group protein B1-like Neighboring gene translocase of outer mitochondrial membrane 20 like Neighboring gene translocase of inner mitochondrial membrane 9 Neighboring gene KIAA0586 Neighboring gene heat shock factor-binding protein 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AT-rich interactive domain-containing protein 4A
    Names
    AT rich interactive domain 4A (RBP1-like)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      120392731..120468836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143782.2 → XP_014999268.1  AT-rich interactive domain-containing protein 4A isoform X1

      UniProtKB/TrEMBL
      F7E2A1
      Conserved Domains (4) summary
      smart00501
      Location:312 → 401
      BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain
      smart00333
      Location:58 → 113
      TUDOR; Tudor domain
      pfam08169
      Location:171 → 261
      RBB1NT; RBB1NT (NUC162) domain
      pfam11717
      Location:575 → 629
      Tudor-knot; RNA binding activity-knot of a chromodomain

    2. XM_015143784.2 → XP_014999270.1  AT-rich interactive domain-containing protein 4A isoform X2

      UniProtKB/TrEMBL
      F7E2A1, F7E2A7, H9FY01
      Related
      ENSMMUP00000004681.4, ENSMMUT00000004971.4
      Conserved Domains (4) summary
      smart00501
      Location:312 → 401
      BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain
      smart00333
      Location:58 → 113
      TUDOR; Tudor domain
      pfam08169
      Location:171 → 261
      RBB1NT; RBB1NT (NUC162) domain
      pfam11717
      Location:575 → 629
      Tudor-knot; RNA binding activity-knot of a chromodomain

    3. XM_015143783.2 → XP_014999269.1  AT-rich interactive domain-containing protein 4A isoform X1

      UniProtKB/TrEMBL
      F7E2A1
      Conserved Domains (4) summary
      smart00501
      Location:312 → 401
      BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain
      smart00333
      Location:58 → 113
      TUDOR; Tudor domain
      pfam08169
      Location:171 → 261
      RBB1NT; RBB1NT (NUC162) domain
      pfam11717
      Location:575 → 629
      Tudor-knot; RNA binding activity-knot of a chromodomain
    Nucleotide Protein
    Heading Accession and Version

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