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    BCL9 BCL9 transcription coactivator [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700800, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BCL9provided by VGNC
    Official Full Name
    BCL9 transcription coactivatorprovided by VGNC
    Primary source
    VGNC:VGNC:70041
    Locus tag
    EGK_01195
    See related
    Ensembl:ENSMMUG00000016786
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BCL9 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (102478863..102568108, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (122390347..122479332)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene gap junction protein alpha 5 Neighboring gene acid phosphatase 6, lysophosphatidic Neighboring gene transcription elongation factor A protein-like 8 Neighboring gene olfactory receptor 5V1-like Neighboring gene olfactory receptor 5V1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-catenin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of beta-catenin-TCF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    B-cell CLL/lymphoma 9 protein
    Names
    B cell CLL/lymphoma 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261320.1 → NP_001248249.1  B-cell CLL/lymphoma 9 protein

      See identical proteins and their annotated locations for NP_001248249.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047863
      UniProtKB/TrEMBL
      A0A8J8XAC9, F7D4Z2, G7MG41
      Related
      ENSMMUP00000022067.2, ENSMMUT00000023584.4
      Conserved Domains (2) summary
      PHA03247
      Location:571 → 1186
      PHA03247; large tegument protein UL36; Provisional
      pfam11502
      Location:350 → 388
      BCL9; B-cell lymphoma 9 protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      102478863..102568108 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149498.2 → XP_015004984.1  B-cell CLL/lymphoma 9 protein isoform X3

      Conserved Domains (1) summary
      pfam11502
      Location:276 → 314
      BCL9; B-cell lymphoma 9 protein

    2. XM_015149493.2 → XP_015004979.1  B-cell CLL/lymphoma 9 protein isoform X2

      Conserved Domains (1) summary
      pfam11502
      Location:350 → 388
      BCL9; B-cell lymphoma 9 protein

    3. XM_028835532.1 → XP_028691365.1  B-cell CLL/lymphoma 9 protein isoform X1

      UniProtKB/TrEMBL
      A0A8J8XAC9, F7D4Z2, G7MG41
      Conserved Domains (2) summary
      PHA03247
      Location:571 → 1186
      PHA03247; large tegument protein UL36; Provisional
      pfam11502
      Location:350 → 388
      BCL9; B-cell lymphoma 9 protein

    4. XM_015149484.2 → XP_015004970.1  B-cell CLL/lymphoma 9 protein isoform X1

      UniProtKB/TrEMBL
      A0A8J8XAC9, F7D4Z2, G7MG41
      Conserved Domains (2) summary
      PHA03247
      Location:571 → 1186
      PHA03247; large tegument protein UL36; Provisional
      pfam11502
      Location:350 → 388
      BCL9; B-cell lymphoma 9 protein
    Nucleotide Protein
    Heading Accession and Version

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