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    PHF19 PHD finger protein 19 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704050, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PHF19provided by VGNC
    Official Full Name
    PHD finger protein 19provided by VGNC
    Primary source
    VGNC:VGNC:75857
    Locus tag
    EGK_07372
    See related
    Ensembl:ENSMMUG00000010623
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PHF19 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (21831495..21855678)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (18394813..18415239)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene complement C5 Neighboring gene TNF receptor associated factor 1 Neighboring gene uncharacterized LOC106993618 Neighboring gene proteasome 26S subunit, non-ATPase 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein 19
    Names
    Polycomb-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      21831495..21855678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015116943.2 → XP_014972429.1  PHD finger protein 19 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QU71, A0A1D5RFI1, A0A8J8YIB1, G7NG20
      Related
      ENSMMUP00000051601.1, ENSMMUT00000054168.2
      Conserved Domains (4) summary
      cd15579
      Location:98 → 150
      PHD1_PHF19; PHD finger 1 found in PHD finger protein 19 (PHF19)
      cd15581
      Location:197 → 248
      PHD2_PHF19; PHD finger 2 found in PHD finger protein 19 (PHF19)
      pfam14061
      Location:531 → 578
      Mtf2_C; Polycomb-like MTF2 factor 2
      cd20451
      Location:39 → 95
      Tudor_PHF19; Tudor domain found in PHD finger protein1 (PHF19) and similar proteins

    2. XM_028834902.1 → XP_028690735.1  PHD finger protein 19 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RFI1, F7BK07
      Related
      ENSMMUP00000013924.4, ENSMMUT00000014862.4
      Conserved Domains (4) summary
      smart00333
      Location:38 → 87
      TUDOR; Tudor domain
      cd15579
      Location:98 → 150
      PHD1_PHF19; PHD finger 1 found in PHD finger protein 19 (PHF19)
      pfam14061
      Location:508 → 554
      Mtf2_C; Polycomb-like MTF2 factor 2
      cl22851
      Location:197 → 247
      PHD_SF; PHD finger superfamily

    3. XM_015116944.2 → XP_014972430.1  PHD finger protein 19 isoform X3

      Conserved Domains (2) summary
      pfam14061
      Location:322 → 369
      Mtf2_C; Polycomb-like MTF2 factor 2
      cl22851
      Location:1 → 39
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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