U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ARNTL aryl hydrocarbon receptor nuclear translocator like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700464, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ARNTLprovided by VGNC
    Official Full Name
    aryl hydrocarbon receptor nuclear translocator likeprovided by VGNC
    Primary source
    VGNC:VGNC:99550
    Locus tag
    EGK_06476
    See related
    Ensembl:ENSMMUG00000009690
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ARNTL in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (52198730..52310849, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (53008510..53119020, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672324 Neighboring gene parathyroid hormone Neighboring gene BTB domain containing 10 Neighboring gene splicing factor, proline- and glutamine-rich-like Neighboring gene 5S ribosomal RNA Neighboring gene lysophosphatidic acid receptor 1 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in circadian rhythm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of aryl hydrocarbon receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    aryl hydrocarbon receptor nuclear translocator-like protein 1
    Names
    Brain and muscle ARNT-like 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257837.1 → NP_001244766.1  aryl hydrocarbon receptor nuclear translocator-like protein 1

      See identical proteins and their annotated locations for NP_001244766.1

      Status: PROVISIONAL

      Source sequence(s)
      JU334500
      UniProtKB/TrEMBL
      A0A5F7ZTV4, A0A8J8XW54, F6XNT8, F6YAP9, G7NDW2
      Related
      ENSMMUP00000012674.3, ENSMMUT00000013527.4
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:339 → 441
      PAS_11; PAS domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      52198730..52310849 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832574.1 → XP_028688407.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X9

      UniProtKB/TrEMBL
      F6XNT8, I0FKN0
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:338 → 440
      PAS_11; PAS domain

    2. XM_028832572.1 → XP_028688405.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A5F7ZTV4, A0A8J8XW54, F6XNT8, F6YAP9, G7NDW2
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:339 → 441
      PAS_11; PAS domain

    3. XM_028832579.1 → XP_028688412.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X13

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:296 → 398
      PAS_11; PAS domain

    4. XM_015114732.2 → XP_014970218.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X9

      UniProtKB/TrEMBL
      F6XNT8, I0FKN0
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:338 → 440
      PAS_11; PAS domain

    5. XM_028832571.1 → XP_028688404.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X7

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:338 → 440
      PAS_11; PAS domain

    6. XM_015114730.2 → XP_014970216.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A5F7ZTV4, A0A8J8XW54, F6XNT8, F6YAP9, G7NDW2
      Related
      ENSMMUP00000069046.1, ENSMMUT00000093937.1
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:339 → 441
      PAS_11; PAS domain

    7. XM_015114727.2 → XP_014970213.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X6

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:339 → 441
      PAS_11; PAS domain

    8. XM_015114738.2 → XP_014970224.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X14

      UniProtKB/TrEMBL
      F6XNT8, F6YAN0
      Related
      ENSMMUP00000012676.4, ENSMMUT00000013529.4
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:295 → 397
      PAS_11; PAS domain

    9. XM_028832577.1 → XP_028688410.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X12

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:295 → 397
      PAS_11; PAS domain

    10. XM_028832578.1 → XP_028688411.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X13

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:296 → 398
      PAS_11; PAS domain

    11. XM_015114731.2 → XP_014970217.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X9

      UniProtKB/TrEMBL
      F6XNT8, I0FKN0
      Related
      ENSMMUP00000063762.1, ENSMMUT00000084765.1
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:338 → 440
      PAS_11; PAS domain

    12. XM_015114729.2 → XP_014970215.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A5F7ZTV4, A0A8J8XW54, F6XNT8, F6YAP9, G7NDW2
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:339 → 441
      PAS_11; PAS domain

    13. XM_015114726.2 → XP_014970212.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X6

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:339 → 441
      PAS_11; PAS domain

    14. XM_015114737.2 → XP_014970223.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X14

      UniProtKB/TrEMBL
      F6XNT8, F6YAN0
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:295 → 397
      PAS_11; PAS domain

    15. XM_015114736.2 → XP_014970222.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X13

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:296 → 398
      PAS_11; PAS domain

    16. XM_015114733.2 → XP_014970219.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X11

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:296 → 398
      PAS_11; PAS domain

    17. XM_015114734.2 → XP_014970220.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X11

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:296 → 398
      PAS_11; PAS domain

    18. XM_028832576.1 → XP_028688409.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X12

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:295 → 397
      PAS_11; PAS domain

    19. XM_015114735.2 → XP_014970221.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X11

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:106 → 165
      PAS; PAS domain
      cd11438
      Location:24 → 87
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:296 → 398
      PAS_11; PAS domain

    20. XM_015114728.2 → XP_014970214.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X6

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:339 → 441
      PAS_11; PAS domain

    21. XM_015114725.2 → XP_014970211.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X5

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:168 → 227
      PAS; PAS domain
      cd11438
      Location:86 → 149
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:358 → 460
      PAS_11; PAS domain

    22. XM_015114724.2 → XP_014970210.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X5

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:168 → 227
      PAS; PAS domain
      cd11438
      Location:86 → 149
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:358 → 460
      PAS_11; PAS domain

    23. XM_028832570.1 → XP_028688403.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X5

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:168 → 227
      PAS; PAS domain
      cd11438
      Location:86 → 149
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:358 → 460
      PAS_11; PAS domain

    24. XM_028832575.1 → XP_028688408.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X10

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      smart00091
      Location:132 → 191
      PAS; PAS domain
      cd11438
      Location:50 → 113
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:322 → 424
      PAS_11; PAS domain

    25. XM_028832573.1 → XP_028688406.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X9

      UniProtKB/TrEMBL
      F6XNT8, I0FKN0
      Conserved Domains (3) summary
      smart00091
      Location:149 → 208
      PAS; PAS domain
      cd11438
      Location:67 → 130
      bHLH-PAS_ARNTL_PASD3; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator-like protein 1 (ARNTL) and similar proteins
      pfam14598
      Location:338 → 440
      PAS_11; PAS domain

    26. XM_028832569.1 → XP_028688402.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X4

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      pfam14598
      Location:381 → 483
      PAS_11; PAS domain
      pfam00010
      Location:117 → 169
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:189 → 296
      PAS; PAS fold

    27. XM_028832567.1 → XP_028688400.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X2

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      pfam14598
      Location:381 → 483
      PAS_11; PAS domain
      pfam00010
      Location:117 → 169
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:189 → 296
      PAS; PAS fold

    28. XM_028832568.1 → XP_028688401.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      pfam14598
      Location:382 → 484
      PAS_11; PAS domain
      pfam00010
      Location:117 → 169
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:189 → 296
      PAS; PAS fold

    29. XM_028832566.1 → XP_028688399.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1

      UniProtKB/TrEMBL
      F6XNT8
      Conserved Domains (3) summary
      pfam14598
      Location:382 → 484
      PAS_11; PAS domain
      pfam00010
      Location:117 → 169
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:189 → 296
      PAS; PAS fold
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.