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    CFAP52 cilia and flagella associated protein 52 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 722040, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CFAP52provided by VGNC
    Official Full Name
    cilia and flagella associated protein 52provided by VGNC
    Primary source
    VGNC:VGNC:70957
    See related
    Ensembl:ENSMMUG00000009399
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    WDR16
    Orthologs
    human mouse all
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    Genomic context

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    See CFAP52 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (9376199..9446117)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (9616760..9693111)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673054 Neighboring gene netrin 1 Neighboring gene syntaxin 8 Neighboring gene ATP synthase subunit f, mitochondrial pseudogene Neighboring gene ubiquitin specific peptidase 43 Neighboring gene dehydrogenase/reductase 7C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cilia- and flagella-associated protein 52
    Names
    WD repeat domain 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      9376199..9446117
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001118238.4 → XP_001118238.3  cilia- and flagella-associated protein 52

      UniProtKB/TrEMBL
      F6XAK6
      Related
      ENSMMUP00000012304.4, ENSMMUT00000013127.4
      Conserved Domains (3) summary
      COG2319
      Location:1 → 405
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:420 → 459
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:346 → 615
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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