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    RORC RAR related orphan receptor C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717052, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RORCprovided by VGNC
    Official Full Name
    RAR related orphan receptor Cprovided by VGNC
    Primary source
    VGNC:VGNC:76719
    Locus tag
    EGK_01272
    See related
    Ensembl:ENSMMUG00000012138
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RORC in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (99258291..99284418)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (126328747..126354852, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene thioesterase superfamily member 5 Neighboring gene C2 calcium dependent domain containing 4D Neighboring gene leucine rich repeat and Ig domain containing 4 Neighboring gene tudor and KH domain containing Neighboring gene ornithine decarboxylase antizyme 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor ROR-gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      99258291..99284418
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002801779.3 → XP_002801825.3  nuclear receptor ROR-gamma isoform X1

      UniProtKB/TrEMBL
      F7GZS9, F7GZT0
      Related
      ENSMMUP00000015923.4, ENSMMUT00000017001.4
      Conserved Domains (2) summary
      cd06939
      Location:268 → 506
      NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
      cd06968
      Location:24 → 118
      NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

    2. XM_028828896.1 → XP_028684729.1  nuclear receptor ROR-gamma isoform X3

      UniProtKB/TrEMBL
      A2D654
      Conserved Domains (2) summary
      cd06968
      Location:24 → 118
      NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
      cl11397
      Location:268 → 431
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    3. XM_002801781.3 → XP_002801827.2  nuclear receptor ROR-gamma isoform X2

      UniProtKB/TrEMBL
      H9ZC27, H9ZC28, H9ZC29
      Related
      ENSMMUP00000061572.1, ENSMMUT00000103082.1
      Conserved Domains (2) summary
      cd06939
      Location:247 → 485
      NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
      cd06968
      Location:4 → 97
      NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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