U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PIERCE1 piercer of microtubule wall 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 720855, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PIERCE1provided by VGNC
    Official Full Name
    piercer of microtubule wall 1provided by VGNC
    Primary source
    VGNC:VGNC:104881
    Locus tag
    EGK_07213
    See related
    Ensembl:ENSMMUG00000056886
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C15H9orf116
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PIERCE1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (2752335..2757228)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (2847440..2852325)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene lipocalin 1 Neighboring gene uncharacterized LOC106993570 Neighboring gene mitochondrial ribosomal protein S2 Neighboring gene protein phosphatase 1 regulatory subunit 26 Neighboring gene uncharacterized LOC114672617

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axonemal microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    UPF0691 protein C9orf116 homolog
    Names
    chromosome 15 C9orf116 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      2752335..2757228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015116388.2 → XP_014971874.1  UPF0691 protein C9orf116 homolog isoform X1

      UniProtKB/TrEMBL
      A0A5F8A776, A0A8J8XCZ1, G7NF86
      Related
      ENSMMUP00000072811.1, ENSMMUT00000099879.1
      Conserved Domains (1) summary
      pfam14892
      Location:9 → 106
      DUF4490; Domain of unknown function (DUF4490)

    2. XM_015116389.2 → XP_014971875.1  UPF0691 protein C9orf116 homolog isoform X2

      Conserved Domains (1) summary
      pfam14892
      Location:9 → 74
      DUF4490; Domain of unknown function (DUF4490)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials