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    SS18L2 SS18 like 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716387, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SS18L2
    Gene description
    SS18 like 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SS18L2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (98541785..98546070)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (100036215..100040475, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene lysozyme like 4 Neighboring gene vasoactive intestinal peptide receptor 1 Neighboring gene SEC22 homolog C, vesicle trafficking protein Neighboring gene natural killer cell triggering receptor Neighboring gene uncharacterized LOC114676332 Neighboring gene uncharacterized LOC106996947 Neighboring gene zinc finger and BTB domain containing 47

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SS18-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      98541785..98546070
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131253.2 → XP_014986739.1  SS18-like protein 2

      UniProtKB/TrEMBL
      F7D8L5, G7MIY2, H9FVB5
      Conserved Domains (1) summary
      pfam05030
      Location:14 → 73
      SSXT; SSXT protein (N-terminal region)
    Nucleotide Protein
    Heading Accession and Version

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