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    BBS4 Bardet-Biedl syndrome 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704508, updated on 5-Mar-2024

    Summary

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    Gene symbol
    BBS4
    Gene description
    Bardet-Biedl syndrome 4
    See related
    Ensembl:ENSMMUG00000013685
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BBS4 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (49495581..49555706)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (51142248..51178623, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene golgin subfamily A member 6C Neighboring gene putative HIG1 domain family member 2B Neighboring gene histone-binding protein RBBP4 pseudogene Neighboring gene ADP dependent glucokinase Neighboring gene uncharacterized LOC106999237

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Bardet-Biedl syndrome 4 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      49495581..49555706
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851100.1 → XP_028706933.1  Bardet-Biedl syndrome 4 protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAH0, F6SCB7, G7MY53, H9FXX3
      Related
      ENSMMUP00000018003.4, ENSMMUT00000019222.4
      Conserved Domains (2) summary
      TIGR02917
      Location:9 → 409
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:101 → 129
      TPR; TPR repeat [structural motif]

    2. XM_028851101.1 → XP_028706934.1  Bardet-Biedl syndrome 4 protein isoform X2

      Conserved Domains (2) summary
      TIGR02917
      Location:1 → 237
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:98 → 126
      TPR; TPR repeat [structural motif]

    3. XM_028851102.1 → XP_028706935.1  Bardet-Biedl syndrome 4 protein isoform X2

      Conserved Domains (2) summary
      TIGR02917
      Location:1 → 237
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:98 → 126
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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