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    LRRC47 leucine rich repeat containing 47 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695608, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRC47provided by VGNC
    Official Full Name
    leucine rich repeat containing 47provided by VGNC
    Primary source
    VGNC:VGNC:74388
    See related
    Ensembl:ENSMMUG00000032284
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC47 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (220700242..220716891)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (2750827..2767139, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 104 Neighboring gene 60S ribosomal protein L31 pseudogene Neighboring gene small integral membrane protein 1 Neighboring gene coiled-coil domain containing 27

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phenylalanine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phenylalanyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 47

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      220700242..220716891
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840790.1 → XP_028696623.1  leucine-rich repeat-containing protein 47

      UniProtKB/TrEMBL
      A0A5F7ZWH2, A0A5F8AFV8
      Related
      ENSMMUP00000076807.1, ENSMMUT00000082752.1
      Conserved Domains (3) summary
      COG4886
      Location:44 → 239
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      PRK09616
      Location:317 → 506
      pheT; phenylalanyl-tRNA synthetase subunit beta; Reviewed
      sd00033
      Location:52 → 76
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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