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    ZSCAN21 zinc finger and SCAN domain containing 21 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710501, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZSCAN21provided by VGNC
    Official Full Name
    zinc finger and SCAN domain containing 21provided by VGNC
    Primary source
    VGNC:VGNC:81892
    See related
    Ensembl:ENSMMUG00000014082
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ZNF38
    Orthologs
    human mouse all
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    Genomic context

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    See ZSCAN21 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (42228506..42246252)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (125563584..125581594)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene zinc finger with KRAB and SCAN domains 1 Neighboring gene uncharacterized LOC114676875 Neighboring gene zinc finger protein 3 Neighboring gene COP9 signalosome subunit 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and SCAN domain-containing protein 21
    Names
    zinc finger protein 38

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      42228506..42246252
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001099737.4 → XP_001099737.1  zinc finger and SCAN domain-containing protein 21

      See identical proteins and their annotated locations for XP_001099737.1

      UniProtKB/TrEMBL
      F7CE27, F7DPF1
      Related
      ENSMMUP00000035473.3, ENSMMUT00000042467.3
      Conserved Domains (4) summary
      smart00431
      Location:42 → 153
      SCAN; leucine rich region
      COG5048
      Location:253 → 453
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:390 → 410
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:446 → 466
      zf-C2H2; Zinc finger, C2H2 type

    2. XM_028845564.1 → XP_028701397.1  zinc finger and SCAN domain-containing protein 21

      UniProtKB/TrEMBL
      F7CE27, F7DPF1
      Related
      ENSMMUP00000075827.1, ENSMMUT00000080844.1
      Conserved Domains (4) summary
      smart00431
      Location:42 → 153
      SCAN; leucine rich region
      COG5048
      Location:253 → 453
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:390 → 410
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:446 → 466
      zf-C2H2; Zinc finger, C2H2 type
    Nucleotide Protein
    Heading Accession and Version

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