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    PACRG parkin coregulated [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704457, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PACRGprovided by VGNC
    Official Full Name
    parkin coregulatedprovided by VGNC
    Primary source
    VGNC:VGNC:75646
    See related
    Ensembl:ENSMMUG00000020412
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PACRG in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (7451691..8029971, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (163807256..164388359)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L37a-like Neighboring gene uncharacterized LOC106998128 Neighboring gene small nucleolar RNA U13 Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene uncharacterized LOC106998111 Neighboring gene keratin, type II cytoskeletal 8 pseudogene Neighboring gene parkin RBR E3 ubiquitin protein ligase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables Hsp90 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    parkin coregulated gene protein
    Names
    PARK2 coregulated

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266357.1 → NP_001253286.1  parkin coregulated gene protein

      See identical proteins and their annotated locations for NP_001253286.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045526
      UniProtKB/TrEMBL
      F6U142, G7MR10
      Related
      ENSMMUP00000026864.1, ENSMMUT00000028711.3
      Conserved Domains (1) summary
      pfam10274
      Location:70 → 253
      ParcG; Parkin co-regulated protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      7451691..8029971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028846744.1 → XP_028702577.1  parkin coregulated gene protein isoform X2

      Conserved Domains (1) summary
      pfam10274
      Location:70 → 211
      ParcG; Parkin co-regulated protein

    2. XM_028846743.1 → XP_028702576.1  parkin coregulated gene protein isoform X1

      Conserved Domains (1) summary
      pfam10274
      Location:70 → 206
      ParcG; Parkin co-regulated protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials