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    STX1B syntaxin 1B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714251, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STX1Bprovided by VGNC
    Official Full Name
    syntaxin 1Bprovided by VGNC
    Primary source
    VGNC:VGNC:78160
    See related
    Ensembl:ENSMMUG00000060212
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See STX1B in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (28411117..28433613, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (28810161..28829681, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 1A, histone lysine methyltransferase Neighboring gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 Neighboring gene syntaxin 4 Neighboring gene zinc finger protein 668

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytic insertion of neurotransmitter receptor to postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    syntaxin-1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      28411117..28433613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125990.2 → XP_014981476.1  syntaxin-1B isoform X1

      UniProtKB/TrEMBL
      F7DNS6, F7GT55, H9EME4
      Related
      ENSMMUP00000066270.1, ENSMMUT00000082903.1
      Conserved Domains (2) summary
      pfam00804
      Location:29 → 226
      Syntaxin
      pfam05739
      Location:227 → 278
      SNARE; SNARE domain

    2. XM_028840648.1 → XP_028696481.1  syntaxin-1B isoform X2

      UniProtKB/TrEMBL
      G7NQX8
      Conserved Domains (2) summary
      pfam00804
      Location:1 → 198
      Syntaxin
      pfam05739
      Location:199 → 250
      SNARE; SNARE domain

    3. XM_028840649.1 → XP_028696482.1  syntaxin-1B isoform X2

      UniProtKB/TrEMBL
      G7NQX8
      Related
      ENSMMUP00000004316.3, ENSMMUT00000004580.4
      Conserved Domains (2) summary
      pfam00804
      Location:1 → 198
      Syntaxin
      pfam05739
      Location:199 → 250
      SNARE; SNARE domain
    Nucleotide Protein
    Heading Accession and Version

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