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    JRK Jrk helix-turn-helix protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694627, updated on 17-Aug-2024

    Summary

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    Official Symbol
    JRKprovided by VGNC
    Official Full Name
    Jrk helix-turn-helix proteinprovided by VGNC
    Primary source
    VGNC:VGNC:73957
    See related
    Ensembl:ENSMMUG00000022452
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See JRK in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (142920305..142945457, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (141903835..141930148, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680364 Neighboring gene activity regulated cytoskeleton associated protein Neighboring gene prostate stem cell antigen Neighboring gene lymphocyte antigen 6 family member K

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    jerky protein homolog
    Names
    jerky homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      142920305..142945457 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015146102.2 → XP_015001588.2  jerky protein homolog isoform X2

      UniProtKB/TrEMBL
      A0A1D5QJN0, A0A5F8APA2
      Conserved Domains (3) summary
      smart00674
      Location:83 → 147
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      pfam04218
      Location:14 → 66
      CENP-B_N; CENP-B N-terminal DNA-binding domain
      pfam03184
      Location:213 → 382
      DDE_1; DDE superfamily endonuclease

    2. XM_001083176.4 → XP_001083176.4  jerky protein homolog isoform X2

      UniProtKB/TrEMBL
      A0A1D5QJN0, A0A5F8APA2
      Related
      ENSMMUP00000079769.1, ENSMMUT00000109542.1
      Conserved Domains (3) summary
      smart00674
      Location:83 → 147
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      pfam04218
      Location:14 → 66
      CENP-B_N; CENP-B N-terminal DNA-binding domain
      pfam03184
      Location:213 → 382
      DDE_1; DDE superfamily endonuclease

    3. XM_015146103.2 → XP_015001589.2  jerky protein homolog isoform X3

      UniProtKB/TrEMBL
      A0A1D5QJN0
      Conserved Domains (3) summary
      smart00674
      Location:83 → 147
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      pfam04218
      Location:14 → 66
      CENP-B_N; CENP-B N-terminal DNA-binding domain
      pfam03184
      Location:213 → 382
      DDE_1; DDE superfamily endonuclease

    4. XM_015146101.2 → XP_015001587.2  jerky protein homolog isoform X1

      UniProtKB/TrEMBL
      F6X2G6, G7N070
      Related
      ENSMMUP00000029541.3, ENSMMUT00000031575.4
      Conserved Domains (3) summary
      smart00674
      Location:83 → 147
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      pfam04218
      Location:14 → 66
      CENP-B_N; CENP-B N-terminal DNA-binding domain
      pfam03184
      Location:213 → 382
      DDE_1; DDE superfamily endonuclease
    Nucleotide Protein
    Heading Accession and Version

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