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    SLC6A20 solute carrier family 6 member 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714045, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC6A20provided by VGNC
    Official Full Name
    solute carrier family 6 member 20provided by VGNC
    Primary source
    VGNC:VGNC:77804
    See related
    Ensembl:ENSMMUG00000010514
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC6A20 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (101759451..101807001, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (96756861..96804044)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene SAC1 like phosphatidylinositide phosphatase Neighboring gene uncharacterized LOC114676340 Neighboring gene leucine zipper transcription factor like 1 Neighboring gene succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-proline transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium- and chloride-dependent transporter XTRP3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      101759451..101807001 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131152.2 → XP_014986638.1  sodium- and chloride-dependent transporter XTRP3 isoform X2

      UniProtKB/TrEMBL
      F7B2G1
      Conserved Domains (1) summary
      cl00456
      Location:1 → 528
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_001114484.4 → XP_001114484.1  sodium- and chloride-dependent transporter XTRP3 isoform X1

      UniProtKB/TrEMBL
      F7B2G1
      Related
      ENSMMUP00000013782.4, ENSMMUT00000014712.4
      Conserved Domains (1) summary
      cd11518
      Location:2 → 577
      SLC6sbd_SIT1; Na(+)- and Cl(-)-dependent imino acid transporter SIT1; solute-binding domain
    Nucleotide Protein
    Heading Accession and Version

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