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    SLX9 SLX9 ribosome biogenesis factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710405, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLX9provided by VGNC
    Official Full Name
    SLX9 ribosome biogenesis factorprovided by VGNC
    Primary source
    VGNC:VGNC:72273
    See related
    Ensembl:ENSMMUG00000000953
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAM207A; C21orf70
    Orthologs
    human mouse all
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    Genomic context

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    See SLX9 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (1736464..1774739, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (1728317..1779517, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase RNA specific B1 Neighboring gene uncharacterized LOC106997216 Neighboring gene uncharacterized protein encoded by LINC01547-like Neighboring gene integrin subunit beta 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 90S preribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of preribosome, small subunit precursor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein FAM207A
    Names
    family with sequence similarity 207 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      1736464..1774739 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015132735.2 → XP_014988221.1  protein FAM207A isoform X1

      UniProtKB/TrEMBL
      F7EKK2, H9G123
      Conserved Domains (1) summary
      pfam15341
      Location:84 → 206
      SLX9; Ribosome biogenesis protein SLX9

    2. XM_015132734.2 → XP_014988220.1  protein FAM207A isoform X1

      UniProtKB/TrEMBL
      F7EKK2, H9G123
      Related
      ENSMMUP00000035722.2, ENSMMUT00000042713.3
      Conserved Domains (1) summary
      pfam15341
      Location:84 → 206
      SLX9; Ribosome biogenesis protein SLX9

    3. XM_028845248.1 → XP_028701081.1  protein FAM207A isoform X2

      Conserved Domains (1) summary
      pfam15341
      Location:1 → 114
      SLX9; Ribosome biogenesis protein SLX9

    4. XM_028845247.1 → XP_028701080.1  protein FAM207A isoform X2

      Conserved Domains (1) summary
      pfam15341
      Location:1 → 114
      SLX9; Ribosome biogenesis protein SLX9

    5. XM_028845249.1 → XP_028701082.1  protein FAM207A isoform X2

      Conserved Domains (1) summary
      pfam15341
      Location:1 → 114
      SLX9; Ribosome biogenesis protein SLX9

    RNA

    1. XR_003727845.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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