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    TBC1D23 TBC1 domain family member 23 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701253, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TBC1D23provided by VGNC
    Official Full Name
    TBC1 domain family member 23provided by VGNC
    Primary source
    VGNC:VGNC:78213
    Locus tag
    EGK_11233
    See related
    Ensembl:ENSMMUG00000020026
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TBC1D23 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (175775512..175840126, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (21179174..21244011)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676450 Neighboring gene nitrilase family member 2 Neighboring gene small nucleolar RNA SNORD61 Neighboring gene vesicle transport through interaction with t-SNAREs homolog 1B pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in embryonic brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle tethering to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TBC1 domain family member 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      175775512..175840126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015129483.2 → XP_014984969.1  TBC1 domain family member 23 isoform X2

      UniProtKB/TrEMBL
      F7GGM6, F7GGM8, H9ZB60
      Related
      ENSMMUP00000026332.4, ENSMMUT00000028145.4
      Conserved Domains (2) summary
      pfam00566
      Location:48 → 246
      RabGAP-TBC; Rab-GTPase-TBC domain
      cl00125
      Location:328 → 439
      RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...

    2. XM_015129488.2 → XP_014984974.1  TBC1 domain family member 23 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QSB7
      Related
      ENSMMUP00000050945.2, ENSMMUT00000068145.2
      Conserved Domains (2) summary
      cl00125
      Location:191 → 302
      RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
      cl02495
      Location:3 → 109
      RabGAP-TBC; Rab-GTPase-TBC domain

    3. XM_015129478.2 → XP_014984964.1  TBC1 domain family member 23 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A3J2, A0A8J8YCH0, F7GGM8, G7MK14
      Related
      ENSMMUP00000071493.1, ENSMMUT00000091998.1
      Conserved Domains (2) summary
      pfam00566
      Location:48 → 246
      RabGAP-TBC; Rab-GTPase-TBC domain
      pfam00581
      Location:334 → 384
      Rhodanese; Rhodanese-like domain
    Nucleotide Protein
    Heading Accession and Version

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