U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LTB lymphotoxin beta [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715518, updated on 17-Aug-2024

    Summary

    Official Symbol
    LTBprovided by VGNC
    Official Full Name
    lymphotoxin betaprovided by VGNC
    Primary source
    VGNC:VGNC:74454
    See related
    Ensembl:ENSMMUG00000008849
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LTB in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (137930251..137932324)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (32439858..32441934, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene allograft inflammatory factor 1 Neighboring gene natural cytotoxicity triggering receptor 3 Neighboring gene leukocyte specific transcript 1 Neighboring gene uncharacterized LOC100427033 Neighboring gene tumor necrosis factor Neighboring gene lymphotoxin alpha

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CD40 receptor binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables tumor necrosis factor receptor binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    lymphotoxin-beta
    Names
    LT-beta
    TNF-C
    lymphotoxin B
    lymphotoxin beta (TNF superfamily, member 3)
    tumor necrosis factor C
    tumor necrosis factor ligand superfamily member 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001047150.1NP_001040615.1  lymphotoxin-beta

      See identical proteins and their annotated locations for NP_001040615.1

      Status: PROVISIONAL

      Source sequence(s)
      AB128049
      UniProtKB/Swiss-Prot
      Q5TM22
      Related
      ENSMMUP00000011600.3, ENSMMUT00000012368.4
      Conserved Domains (1) summary
      pfam00229
      Location:102243
      TNF; TNF(Tumour Necrosis Factor) family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      137930251..137932324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135928.2XP_014991414.1  lymphotoxin-beta isoform X1

      UniProtKB/TrEMBL
      F7DZ03