U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PSD3 pleckstrin and Sec7 domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712115, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PSD3provided by VGNC
    Official Full Name
    pleckstrin and Sec7 domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:84104
    See related
    Ensembl:ENSMMUG00000016385
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PSD3 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (18682018..19385126, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (18278106..19037977, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680194 Neighboring gene uncharacterized LOC106999694 Neighboring gene N-acetyltransferase 2 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene uncharacterized LOC114680196 Neighboring gene uncharacterized LOC114680197 Neighboring gene SH2 domain containing 4A

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of ARF protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    PH and SEC7 domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      18682018..19385126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028852422.1 → XP_028708255.1  PH and SEC7 domain-containing protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZXG3, G7N0L1
      Related
      ENSMMUP00000070352.1, ENSMMUT00000101407.1
      Conserved Domains (2) summary
      cd00171
      Location:825 → 979
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:1024 → 1149
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

    2. XM_028852423.1 → XP_028708256.1  PH and SEC7 domain-containing protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A7S9, G7N0L1
      Related
      ENSMMUP00000073017.1, ENSMMUT00000094093.1
      Conserved Domains (2) summary
      cd00171
      Location:581 → 735
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:780 → 905
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

    3. XM_015144871.2 → XP_015000357.2  PH and SEC7 domain-containing protein 3 isoform X4

      UniProtKB/TrEMBL
      H9F534
      Conserved Domains (2) summary
      cd00171
      Location:516 → 670
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:715 → 840
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

    4. XM_015144870.2 → XP_015000356.2  PH and SEC7 domain-containing protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZTF8, H9F534
      Related
      ENSMMUP00000068939.1, ENSMMUT00000102246.1
      Conserved Domains (2) summary
      cd00171
      Location:548 → 702
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:747 → 872
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

    5. XM_015144872.2 → XP_015000358.1  PH and SEC7 domain-containing protein 3 isoform X5

      UniProtKB/TrEMBL
      F6PKT2, F6VVD5, F7G2Q6
      Related
      ENSMMUP00000027220.4, ENSMMUT00000029094.4
      Conserved Domains (3) summary
      cd00171
      Location:47 → 201
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:246 → 371
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
      pfam00169
      Location:251 → 359
      PH; PH domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.