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    TPRN taperin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721581, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TPRNprovided by VGNC
    Official Full Name
    taperinprovided by VGNC
    Primary source
    VGNC:VGNC:112125
    See related
    Ensembl:ENSMMUG00000001677
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TPRN in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (1006502..1015930)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (1077475..1086606)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC705933 Neighboring gene NADPH dependent diflavin oxidoreductase 1 Neighboring gene transmembrane protein 203 Neighboring gene SS nuclear autoantigen 1 Neighboring gene anaphase promoting complex subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in auditory receptor cell stereocilium organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sensory perception of sound IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in stereocilium maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in stereocilium base IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    taperin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      1006502..1015930
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834556.1 → XP_028690389.1  taperin isoform X1

      UniProtKB/TrEMBL
      F7G3I4
      Conserved Domains (3) summary
      PHA03247
      Location:166 → 463
      PHA03247; large tegument protein UL36; Provisional
      pfam13914
      Location:509 → 633
      Phostensin; Phostensin PP1-binding and SH3-binding region
      pfam13916
      Location:43 → 122
      Phostensin_N; PP1-regulatory protein, Phostensin N-terminal

    2. XM_015116273.2 → XP_014971759.2  taperin isoform X2

      UniProtKB/TrEMBL
      F7G3I4
      Related
      ENSMMUP00000002244.4, ENSMMUT00000002373.4
      Conserved Domains (3) summary
      PHA03247
      Location:166 → 463
      PHA03247; large tegument protein UL36; Provisional
      pfam13914
      Location:509 → 633
      Phostensin; Phostensin PP1-binding and SH3-binding region
      pfam13916
      Location:43 → 122
      Phostensin_N; PP1-regulatory protein, Phostensin N-terminal
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials