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    SNAI1 snail family transcriptional repressor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702353, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SNAI1
    Gene description
    snail family transcriptional repressor 1
    Locus tag
    EGK_02302
    See related
    Ensembl:ENSMMUG00000063295
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNAI1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (85206422..85212490)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (14425675..14431717, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene keratin, type I cytoskeletal 18 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin conjugating enzyme E2 V1 Neighboring gene plasmanylethanolamine desaturase 1 Neighboring gene uncharacterized LOC107000368

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein SNAI1
    Names
    Protein snail-like protein 1
    snail homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      85206422..85212490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001097698.4 → XP_001097698.1  zinc finger protein SNAI1

      See identical proteins and their annotated locations for XP_001097698.1

      UniProtKB/TrEMBL
      A0A5F7ZGU7, A0A8J8XZ41, F7BCG2
      Related
      ENSMMUP00000064816.1, ENSMMUT00000107359.1
      Conserved Domains (3) summary
      COG5048
      Location:177 → 253
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:182 → 202
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:195 → 218
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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