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    SLC4A5 solute carrier family 4 member 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715025, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC4A5provided by VGNC
    Official Full Name
    solute carrier family 4 member 5provided by VGNC
    Primary source
    VGNC:VGNC:106220
    See related
    Ensembl:ENSMMUG00000015605
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC4A5 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (34459459..34605713)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (75231856..75375583, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671932 Neighboring gene uncharacterized LOC114671933 Neighboring gene dynactin subunit 1 Neighboring gene keratin, type I cytoskeletal 18 pseudogene Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase Neighboring gene MOB kinase activator 1A Neighboring gene uncharacterized LOC106993013

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic anion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium:bicarbonate symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables solute:inorganic anion antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bicarbonate transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic anion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of intracellular pH IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in renal system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    electrogenic sodium bicarbonate cotransporter 4
    Names
    solute carrier family 4, sodium bicarbonate cotransporter, member 4
    solute carrier family 4, sodium bicarbonate cotransporter, member 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      34459459..34605713
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112678.2 → XP_014968164.1  electrogenic sodium bicarbonate cotransporter 4 isoform X4

      UniProtKB/TrEMBL
      F6T693
      Conserved Domains (3) summary
      TIGR00834
      Location:113 → 1053
      ae; anion exchange protein
      pfam00955
      Location:487 → 1006
      HCO3_cotransp; HCO3- transporter family
      pfam07565
      Location:140 → 407
      Band_3_cyto; Band 3 cytoplasmic domain

    2. XM_028832360.1 → XP_028688193.1  electrogenic sodium bicarbonate cotransporter 4 isoform X1

      UniProtKB/TrEMBL
      F6T693
      Conserved Domains (1) summary
      cl26877
      Location:156 → 1096
      Band_3_cyto; Band 3 cytoplasmic domain

    3. XM_028832362.1 → XP_028688195.1  electrogenic sodium bicarbonate cotransporter 4 isoform X2

      UniProtKB/TrEMBL
      F6T693
      Conserved Domains (1) summary
      cl26877
      Location:123 → 1063
      Band_3_cyto; Band 3 cytoplasmic domain

    4. XM_015112676.2 → XP_014968162.1  electrogenic sodium bicarbonate cotransporter 4 isoform X4

      UniProtKB/TrEMBL
      F6T693
      Conserved Domains (3) summary
      TIGR00834
      Location:113 → 1053
      ae; anion exchange protein
      pfam00955
      Location:487 → 1006
      HCO3_cotransp; HCO3- transporter family
      pfam07565
      Location:140 → 407
      Band_3_cyto; Band 3 cytoplasmic domain

    5. XM_028832364.1 → XP_028688197.1  electrogenic sodium bicarbonate cotransporter 4 isoform X5

      UniProtKB/TrEMBL
      F6T693, I2CXE8
      Conserved Domains (1) summary
      cl26877
      Location:7 → 938
      Band_3_cyto; Band 3 cytoplasmic domain

    6. XM_028832363.1 → XP_028688196.1  electrogenic sodium bicarbonate cotransporter 4 isoform X3

      UniProtKB/TrEMBL
      F6T693
      Related
      ENSMMUP00000020476.4, ENSMMUT00000021891.4
      Conserved Domains (1) summary
      cl26877
      Location:156 → 1096
      Band_3_cyto; Band 3 cytoplasmic domain

    7. XM_028832361.1 → XP_028688194.1  electrogenic sodium bicarbonate cotransporter 4 isoform X1

      UniProtKB/TrEMBL
      F6T693
      Conserved Domains (1) summary
      cl26877
      Location:156 → 1096
      Band_3_cyto; Band 3 cytoplasmic domain
    Nucleotide Protein
    Heading Accession and Version

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