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    RFC1 replication factor C subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698987, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RFC1provided by VGNC
    Official Full Name
    replication factor C subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:97819
    See related
    Ensembl:ENSMMUG00000009324
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RFC1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (38405929..38484040, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (38915924..39013717, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678280 Neighboring gene WD repeat domain 19 Neighboring gene uncharacterized LOC106998313 Neighboring gene U6 spliceosomal RNA Neighboring gene klotho beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA clamp loader activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA clamp unloader activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of DNA replication factor C complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    replication factor C subunit 1
    Names
    replication factor C (activator 1) 1, 145kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      38405929..38484040 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015138210.2 → XP_014993696.2  replication factor C subunit 1 isoform X2

      UniProtKB/TrEMBL
      H9FY25, I0FTY3
      Related
      ENSMMUP00000012216.3, ENSMMUT00000013034.4
      Conserved Domains (5) summary
      PTZ00121
      Location:14 → 404
      PTZ00121; MAEBL; Provisional
      COG5275
      Location:276 → 502
      COG5275; BRCT domain type II [General function prediction only]
      PRK04195
      Location:584 → 1002
      PRK04195; replication factor C large subunit; Provisional
      cd17752
      Location:402 → 480
      BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
      pfam08519
      Location:914 → 1067
      RFC1; Replication factor RFC1 C terminal domain

    2. XM_001091287.4 → XP_001091287.2  replication factor C subunit 1 isoform X1

      UniProtKB/TrEMBL
      H9FY25, I0FTY3
      Related
      ENSMMUP00000060396.2, ENSMMUT00000056740.2
      Conserved Domains (5) summary
      PTZ00121
      Location:14 → 404
      PTZ00121; MAEBL; Provisional
      COG5275
      Location:276 → 502
      COG5275; BRCT domain type II [General function prediction only]
      PRK04195
      Location:584 → 1003
      PRK04195; replication factor C large subunit; Provisional
      cd17752
      Location:402 → 480
      BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
      pfam08519
      Location:915 → 1068
      RFC1; Replication factor RFC1 C terminal domain

    3. XM_015138212.2 → XP_014993698.2  replication factor C subunit 1 isoform X3

      UniProtKB/TrEMBL
      H9FY25, I0FTY3
      Conserved Domains (5) summary
      PTZ00121
      Location:14 → 336
      PTZ00121; MAEBL; Provisional
      COG5275
      Location:250 → 476
      COG5275; BRCT domain type II [General function prediction only]
      PRK04195
      Location:558 → 977
      PRK04195; replication factor C large subunit; Provisional
      cd17752
      Location:376 → 454
      BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
      pfam08519
      Location:889 → 1042
      RFC1; Replication factor RFC1 C terminal domain

    4. XM_028848397.1 → XP_028704230.1  replication factor C subunit 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5RJA2
      Conserved Domains (4) summary
      COG5275
      Location:46 → 272
      COG5275; BRCT domain type II [General function prediction only]
      PRK04195
      Location:354 → 773
      PRK04195; replication factor C large subunit; Provisional
      pfam08519
      Location:685 → 837
      RFC1; Replication factor RFC1 C terminal domain
      cd17752
      Location:172 → 250
      BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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