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    SYTL1 synaptotagmin like 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715833, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SYTL1provided by VGNC
    Official Full Name
    synaptotagmin like 1provided by VGNC
    Primary source
    VGNC:VGNC:78122
    See related
    Ensembl:ENSMMUG00000004768
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SYTL1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (197381209..197393101, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (26207271..26219016)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene CD164 molecule like 2 Neighboring gene ficolin 3 Neighboring gene mitogen-activated protein kinase kinase kinase 6 Neighboring gene actin, muscle-like Neighboring gene transmembrane protein 222 Neighboring gene U6 spliceosomal RNA Neighboring gene WD and tetratricopeptide repeats 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables neurexin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in exocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      197381209..197393101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001110913.4 → XP_001110913.2  synaptotagmin-like protein 1 isoform X2

      UniProtKB/TrEMBL
      F6SM46, F7GMC4, H9Z353
      Related
      ENSMMUP00000040481.3, ENSMMUT00000047447.3
      Conserved Domains (4) summary
      cd04020
      Location:399 → 555
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cd08393
      Location:267 → 386
      C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
      PHA03169
      Location:114 → 234
      PHA03169; hypothetical protein; Provisional
      pfam02318
      Location:35 → 99
      FYVE_2; FYVE-type zinc finger

    2. XM_015132627.2 → XP_014988113.2  synaptotagmin-like protein 1 isoform X1

      UniProtKB/TrEMBL
      F7GMC0, H9Z353
      Related
      ENSMMUP00000040483.3, ENSMMUT00000047449.3
      Conserved Domains (4) summary
      cd04020
      Location:450 → 606
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cd08393
      Location:318 → 437
      C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
      PHA03169
      Location:62 → 285
      PHA03169; hypothetical protein; Provisional
      pfam02318
      Location:35 → 99
      FYVE_2; FYVE-type zinc finger

    3. XM_028837416.1 → XP_028693249.1  synaptotagmin-like protein 1 isoform X3

      UniProtKB/TrEMBL
      H9Z353
      Conserved Domains (3) summary
      cd04020
      Location:391 → 547
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cd08393
      Location:259 → 378
      C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
      PHA03169
      Location:56 → 226
      PHA03169; hypothetical protein; Provisional

    RNA

    1. XR_001443342.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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