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    ATMIN ATM interactor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717395, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATMINprovided by VGNC
    Official Full Name
    ATM interactorprovided by VGNC
    Primary source
    VGNC:VGNC:70146
    See related
    Ensembl:ENSMMUG00000013086
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATMIN in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (68066205..68077546)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (65699637..65710978)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene chromodomain Y like 2 Neighboring gene C-X9-C motif containing 2 Neighboring gene centromere protein N Neighboring gene chromosome 20 C16orf46 homolog Neighboring gene uncharacterized LOC114674390 Neighboring gene glycine cleavage system protein H

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATM interactor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      68066205..68077546
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126683.2 → XP_014982169.2  ATM interactor isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZKW3, F7H386
      Related
      ENSMMUP00000017187.4, ENSMMUT00000018356.4
      Conserved Domains (1) summary
      sd00017
      Location:132 → 159
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_015126684.2 → XP_014982170.2  ATM interactor isoform X2

      UniProtKB/TrEMBL
      H9F5Q5
      Conserved Domains (1) summary
      sd00017
      Location:28 → 55
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_015126685.2 → XP_014982171.2  ATM interactor isoform X3

      UniProtKB/TrEMBL
      G7NR51

    4. XM_015126686.2 → XP_014982172.2  ATM interactor isoform X3

      UniProtKB/TrEMBL
      G7NR51
    Nucleotide Protein
    Heading Accession and Version

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