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    CERS6 ceramide synthase 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704953, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CERS6provided by VGNC
    Official Full Name
    ceramide synthase 6provided by VGNC
    Primary source
    VGNC:VGNC:71080
    See related
    Ensembl:ENSMMUG00000043509
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    LASS6
    Orthologs
    human mouse all
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    Genomic context

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    See CERS6 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (55591204..55904228)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (55419159..55736804)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 39 Neighboring gene uncharacterized LOC106992608 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106992605 Neighboring gene nitric oxide synthase trafficking

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sphingosine N-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ceramide synthase 6
    Names
    LAG1 homolog, ceramide synthase 6
    LAG1 longevity assurance homolog 6
    NP_001253052.1
    XP_014965738.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266123.2 → NP_001253052.1  ceramide synthase 6

      See identical proteins and their annotated locations for NP_001253052.1

      Status: PROVISIONAL

      Source sequence(s)
      JU475026
      UniProtKB/TrEMBL
      F7FW69, G7N885, H9Z7B4
      Related
      ENSMMUP00000038219.3, ENSMMUT00000045202.3
      Conserved Domains (2) summary
      cd00086
      Location:80 → 127
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03798
      Location:131 → 324
      TRAM_LAG1_CLN8; TLC domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      55591204..55904228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110252.2 → XP_014965738.1  ceramide synthase 6 isoform X1

      UniProtKB/TrEMBL
      F7CYG3, G7N885
      Related
      ENSMMUP00000018835.4, ENSMMUT00000020123.4
      Conserved Domains (2) summary
      cd00086
      Location:80 → 127
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03798
      Location:131 → 324
      TRAM_LAG1_CLN8; TLC domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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