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    SCN3B sodium voltage-gated channel beta subunit 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714673, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SCN3Bprovided by VGNC
    Official Full Name
    sodium voltage-gated channel beta subunit 3provided by VGNC
    Primary source
    VGNC:VGNC:77064
    Locus tag
    EGK_07015
    See related
    Ensembl:ENSMMUG00000000343
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SCN3B in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (116613746..116642716, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (116476775..116505112, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene GRAM domain containing 1B Neighboring gene 60S ribosomal protein L36 pseudogene Neighboring gene splicing factor 3A subunit 3 pseudogene Neighboring gene uncharacterized LOC114672430 Neighboring gene zinc finger protein 202 Neighboring gene olfactory receptor, family 6, subfamily X, member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sodium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of heart rate by cardiac conduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ventricular cardiac muscle cell action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of voltage-gated sodium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium channel subunit beta-3
    Names
    sodium channel, voltage-gated, type III, beta subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194283.2 → NP_001181212.1  sodium channel subunit beta-3 precursor

      See identical proteins and their annotated locations for NP_001181212.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000111
      UniProtKB/TrEMBL
      A0A5S6RBK1, A0A8J8YSM2, F6YMP0, G7NCM8
      Related
      ENSMMUP00000000465.4, ENSMMUT00000000502.4
      Conserved Domains (2) summary
      pfam07686
      Location:28 → 140
      V-set; Immunoglobulin V-set domain
      cd00096
      Location:31 → 37
      Ig; Ig strand A' [structural motif]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      116613746..116642716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832733.1 → XP_028688566.1  sodium channel subunit beta-3 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RBK1, A0A8J8YSM2, F6YMP0, G7NCM8
      Conserved Domains (2) summary
      pfam07686
      Location:28 → 140
      V-set; Immunoglobulin V-set domain
      cd00096
      Location:31 → 37
      Ig; Ig strand A' [structural motif]

    2. XM_015115925.2 → XP_014971411.1  sodium channel subunit beta-3 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RBK1, A0A8J8YSM2, F6YMP0, G7NCM8
      Conserved Domains (2) summary
      pfam07686
      Location:28 → 140
      V-set; Immunoglobulin V-set domain
      cd00096
      Location:31 → 37
      Ig; Ig strand A' [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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