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    LOC718510 calcium-binding protein 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718510, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC718510
    Gene description
    calcium-binding protein 5
    Locus tag
    EGK_10826
    See related
    Ensembl:ENSMMUG00000014293
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    CABP5; PLA2G4C
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    Genomic context

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    See LOC718510 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (48006074..48083664, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (43383441..43443601, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene seminal plasma protein pB1 Neighboring gene epididymal sperm binding protein 1 Neighboring gene uncharacterized LOC106994810 Neighboring gene DNA ligase 1 Neighboring gene zinc finger SWIM-type containing 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipase A2 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycerophospholipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytosolic phospholipase A2 gamma; calcium-binding protein 5
    Names
    phospholipase A2 group IVC
    phospholipase A2, group IVC (cytosolic, calcium-independent)
    XP_014979854.1
    XP_014979925.2
    XP_014979927.2
    XP_028694404.1
    XP_028694405.1
    XP_028694406.1
    XP_028694407.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      48006074..48083664 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028838573.1 → XP_028694406.1  cytosolic phospholipase A2 gamma isoform X2

      UniProtKB/TrEMBL
      G7NNP0
      Conserved Domains (1) summary
      cd07202
      Location:4 → 509
      cPLA2_Grp-IVC; Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent

    2. XM_028838571.1 → XP_028694404.1  cytosolic phospholipase A2 gamma isoform X1

      UniProtKB/TrEMBL
      F7BST5, G7NNP0
      Conserved Domains (1) summary
      cd07202
      Location:4 → 528
      cPLA2_Grp-IVC; Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent

    3. XM_015124368.2 → XP_014979854.1  calcium-binding protein 5 isoform X6

      UniProtKB/TrEMBL
      A0A663DEW5, A0A8J8XBM8, F7EMB5, G7NNN9
      Related
      ENSMMUP00000023586.3, ENSMMUT00000025210.4
      Conserved Domains (1) summary
      PTZ00184
      Location:25 → 171
      PTZ00184; calmodulin; Provisional

    4. XM_028838572.1 → XP_028694405.1  cytosolic phospholipase A2 gamma isoform X1

      UniProtKB/TrEMBL
      F7BST5, G7NNP0
      Related
      ENSMMUP00000018771.4, ENSMMUT00000020055.4
      Conserved Domains (1) summary
      cd07202
      Location:4 → 528
      cPLA2_Grp-IVC; Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent

    5. XM_028838574.1 → XP_028694407.1  cytosolic phospholipase A2 gamma isoform X5

      UniProtKB/TrEMBL
      G7NNP0
      Conserved Domains (1) summary
      cl11396
      Location:4 → 423
      Patatin_and_cPLA2; Patatins and Phospholipases

    6. XM_015124441.2 → XP_014979927.2  cytosolic phospholipase A2 gamma isoform X4

      UniProtKB/TrEMBL
      A0A5F8AFV3, G7NNP0
      Related
      ENSMMUP00000076802.1, ENSMMUT00000093039.1
      Conserved Domains (1) summary
      cd07202
      Location:4 → 528
      cPLA2_Grp-IVC; Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent

    7. XM_015124439.2 → XP_014979925.2  cytosolic phospholipase A2 gamma isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q4A4, G7NNP0
      Related
      ENSMMUP00000042868.2, ENSMMUT00000062151.2
      Conserved Domains (1) summary
      cd07202
      Location:4 → 531
      cPLA2_Grp-IVC; Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent
    Nucleotide Protein
    Heading Accession and Version

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