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    BCL6B BCL6B transcription repressor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713925, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BCL6Bprovided by VGNC
    Official Full Name
    BCL6B transcription repressorprovided by VGNC
    Primary source
    VGNC:VGNC:70037
    Locus tag
    EGK_08099
    See related
    Ensembl:ENSMMUG00000016268
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BCL6B in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (6780848..6787477)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (6984040..6991292)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993873 Neighboring gene microRNA mir-195 Neighboring gene microRNA mir-497 Neighboring gene solute carrier family 16 member 13 Neighboring gene solute carrier family 16 member 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    B-cell CLL/lymphoma 6 member B protein
    Names
    B cell CLL/lymphoma 6B
    Bcl6-associated zinc finger protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      6780848..6787477
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001105202.4 → XP_001105202.1  B-cell CLL/lymphoma 6 member B protein

      See identical proteins and their annotated locations for XP_001105202.1

      UniProtKB/TrEMBL
      A0A8J8XEA5, F7GAW9, G7NI74
      Conserved Domains (4) summary
      COG5189
      Location:296 → 425
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:325 → 345
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:365 → 390
      zf-H2C2_2; Zinc-finger double domain
      cl38908
      Location:19 → 132
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

    2. XM_028835951.1 → XP_028691784.1  B-cell CLL/lymphoma 6 member B protein

      UniProtKB/TrEMBL
      A0A8J8XEA5, F7GAW9, G7NI74
      Related
      ENSMMUP00000021377.1, ENSMMUT00000022855.3
      Conserved Domains (4) summary
      COG5189
      Location:296 → 425
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:325 → 345
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:365 → 390
      zf-H2C2_2; Zinc-finger double domain
      cl38908
      Location:19 → 132
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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