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    HDAC11 histone deacetylase 11 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693537, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HDAC11provided by VGNC
    Official Full Name
    histone deacetylase 11provided by VGNC
    Primary source
    VGNC:VGNC:73196
    See related
    Ensembl:ENSMMUG00000001369
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HDAC11 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (144875316..144903615)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (52894033..52922214, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 210 Neighboring gene proline-rich protein 3 pseudogene Neighboring gene uncharacterized LOC114676396 Neighboring gene uncharacterized LOC106996818 Neighboring gene fibulin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone deacetylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone deacetylase 11
    NP_001252584.1
    XP_014985597.1
    XP_014985598.1
    XP_014985599.1
    XP_014985600.1
    XP_028698893.1
    XP_028698895.1
    XP_028698896.1
    XP_028698897.1
    XP_028698898.1
    XP_028698899.1
    XP_028698900.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265655.1 → NP_001252584.1  histone deacetylase 11

      See identical proteins and their annotated locations for NP_001252584.1

      Status: PROVISIONAL

      Source sequence(s)
      JV636381
      UniProtKB/TrEMBL
      F7HB86, G7MKN7
      Related
      ENSMMUP00000039802.3, ENSMMUT00000046774.3
      Conserved Domains (1) summary
      cd09993
      Location:35 → 319
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      144875316..144903615
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130111.2 → XP_014985597.1  histone deacetylase 11 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RC17, F7D6G8, F7HB89, H9F963, I2CXN6
      Related
      ENSMMUP00000039801.3, ENSMMUT00000046773.3
      Conserved Domains (1) summary
      cd09993
      Location:7 → 291
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    2. XM_028843066.1 → XP_028698899.1  histone deacetylase 11 isoform X6

      Conserved Domains (1) summary
      cd09993
      Location:62 → 243
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    3. XM_015130113.2 → XP_014985599.1  histone deacetylase 11 isoform X7

      UniProtKB/TrEMBL
      A0A1D5QGQ7, A0A1D5RHI1
      Related
      ENSMMUP00000047227.1, ENSMMUT00000057606.2
      Conserved Domains (1) summary
      cd09993
      Location:35 → 240
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    4. XM_028843067.1 → XP_028698900.1  histone deacetylase 11 isoform X8

      Conserved Domains (1) summary
      cl17011
      Location:41 → 125
      Arginase_HDAC; Arginase-like and histone-like hydrolases

    5. XM_028843062.1 → XP_028698895.1  histone deacetylase 11 isoform X3

      UniProtKB/TrEMBL
      G7MKN7
      Conserved Domains (1) summary
      cd09993
      Location:35 → 279
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    6. XM_015130112.2 → XP_014985598.1  histone deacetylase 11 isoform X2

      UniProtKB/TrEMBL
      G7MKN7
      Conserved Domains (1) summary
      cd09993
      Location:35 → 280
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    7. XM_028843063.1 → XP_028698896.1  histone deacetylase 11 isoform X4

      Conserved Domains (1) summary
      cd09993
      Location:90 → 271
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    8. XM_028843060.1 → XP_028698893.1  histone deacetylase 11 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RC17, F7D6G8, F7HB89, H9F963, I2CXN6
      Related
      ENSMMUP00000001824.4, ENSMMUT00000001935.4
      Conserved Domains (1) summary
      cd09993
      Location:7 → 291
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    9. XM_028843065.1 → XP_028698898.1  histone deacetylase 11 isoform X5

      UniProtKB/TrEMBL
      H9F963
      Conserved Domains (1) summary
      cd09993
      Location:7 → 252
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    10. XM_015130114.2 → XP_014985600.1  histone deacetylase 11 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RC17, F7D6G8, F7HB89, H9F963, I2CXN6
      Conserved Domains (1) summary
      cd09993
      Location:7 → 291
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11

    11. XM_028843064.1 → XP_028698897.1  histone deacetylase 11 isoform X5

      UniProtKB/TrEMBL
      H9F963
      Conserved Domains (1) summary
      cd09993
      Location:7 → 252
      HDAC_classIV; Histone deacetylase class IV also known as histone deacetylase 11
    Nucleotide Protein
    Heading Accession and Version

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