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    VGLL4 vestigial like family member 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699034, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VGLL4provided by VGNC
    Official Full Name
    vestigial like family member 4provided by VGNC
    Primary source
    VGNC:VGNC:79755
    Locus tag
    EGK_11416
    See related
    Ensembl:ENSMMUG00000021806
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See VGLL4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (142947937..143112301, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (54611135..54774955)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene histamine receptor H1 Neighboring gene mitochondrial intermembrane space import and assembly protein 40 pseudogene Neighboring gene autophagy related 7 Neighboring gene TAM41 mitochondrial translocator assembly and maintenance homolog Neighboring gene nucleophosmin-like Neighboring gene Fanconi anemia group D2 protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription cofactor vestigial-like protein 4
    Names
    vestigial like 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194848.3 → NP_001181777.1  transcription cofactor vestigial-like protein 4

      See identical proteins and their annotated locations for NP_001181777.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000283
      UniProtKB/TrEMBL
      A0A5F8A3C3, A0A8J8XJK8, G7MKQ2
      Related
      ENSMMUP00000072394.1, ENSMMUT00000105268.1
      Conserved Domains (2) summary
      smart00711
      Location:240 → 255
      TDU; Short repeats in human TONDU, fly vestigial and other proteins
      pfam15245
      Location:14 → 230
      VGLL4; Transcription cofactor vestigial-like protein 4

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      142947937..143112301 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130229.2 → XP_014985715.1  transcription cofactor vestigial-like protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QPS6
      Related
      ENSMMUP00000050053.2, ENSMMUT00000056429.2
      Conserved Domains (2) summary
      smart00711
      Location:234 → 249
      TDU; Short repeats in human TONDU, fly vestigial and other proteins
      pfam15245
      Location:8 → 224
      VGLL4; Transcription cofactor vestigial-like protein 4

    2. XM_015130230.2 → XP_014985716.1  transcription cofactor vestigial-like protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QPS6
      Conserved Domains (2) summary
      smart00711
      Location:234 → 249
      TDU; Short repeats in human TONDU, fly vestigial and other proteins
      pfam15245
      Location:8 → 224
      VGLL4; Transcription cofactor vestigial-like protein 4

    3. XM_028843150.1 → XP_028698983.1  transcription cofactor vestigial-like protein 4 isoform X2

      Conserved Domains (2) summary
      smart00711
      Location:203 → 218
      TDU; Short repeats in human TONDU, fly vestigial and other proteins
      pfam15245
      Location:8 → 193
      VGLL4; Transcription cofactor vestigial-like protein 4

    4. XM_015130231.2 → XP_014985717.1  transcription cofactor vestigial-like protein 4 isoform X3

      Conserved Domains (2) summary
      smart00711
      Location:154 → 169
      TDU; Short repeats in human TONDU, fly vestigial and other proteins
      pfam15245
      Location:7 → 144
      VGLL4; Transcription cofactor vestigial-like protein 4
    Nucleotide Protein
    Heading Accession and Version

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