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    AJUBA ajuba LIM protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712865, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AJUBAprovided by VGNC
    Official Full Name
    ajuba LIM proteinprovided by VGNC
    Primary source
    VGNC:VGNC:69645
    Locus tag
    EGK_18011
    See related
    Ensembl:ENSMMUG00000008475
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    JUB
    Orthologs
    human mouse all
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    Genomic context

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    See AJUBA in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (84999875..85011797, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (84309478..84322026, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene HAUS augmin like complex subunit 4 Neighboring gene uncharacterized LOC106999357 Neighboring gene chromosome 7 C14orf93 homolog Neighboring gene 40S ribosomal protein S3a-like Neighboring gene proteasome 20S subunit beta 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of hippo signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of miRNA-mediated gene silencing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LIM domain-containing protein ajuba
    Names
    jub, ajuba homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      84999875..85011797 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001104222.4 → XP_001104222.1  LIM domain-containing protein ajuba

      See identical proteins and their annotated locations for XP_001104222.1

      UniProtKB/TrEMBL
      A0A1D5RD32, A0A8J8Y0F3, F6THL2, G7MX31
      Related
      ENSMMUP00000058225.2, ENSMMUT00000074457.2
      Conserved Domains (4) summary
      PHA03418
      Location:18 → 103
      PHA03418; hypothetical E4 protein; Provisional
      cd09352
      Location:338 → 391
      LIM1_Ajuba_like; The first LIM domain of Ajuba-like proteins
      cd09355
      Location:403 → 455
      LIM2_Ajuba_like; The second LIM domain of Ajuba-like proteins
      cd09438
      Location:463 → 524
      LIM3_Ajuba_like; The third LIM domain of Ajuba-like proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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