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    POLR3H RNA polymerase III subunit H [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707546, updated on 17-Aug-2024

    Summary

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    Official Symbol
    POLR3Hprovided by VGNC
    Official Full Name
    RNA polymerase III subunit Hprovided by VGNC
    Primary source
    VGNC:VGNC:76144
    Locus tag
    EGK_03090
    See related
    Ensembl:ENSMMUG00000001459
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See POLR3H in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (9964772..9981807)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (83606247..83622971, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene X-ray repair cross complementing 6 Neighboring gene phosphomannomutase 1 Neighboring gene uncharacterized LOC114670348 Neighboring gene cold shock domain containing C2 Neighboring gene aconitase 2 Neighboring gene uncharacterized LOC114670349 Neighboring gene PHD finger protein 5A Neighboring gene transducer of ERBB2, 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase III promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase III subunit RPC8
    Names
    polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
    NP_001253541.1
    XP_015005885.1
    XP_015005886.1
    XP_028683138.1
    XP_028683139.1
    XP_028683140.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266612.1 → NP_001253541.1  DNA-directed RNA polymerase III subunit RPC8

      See identical proteins and their annotated locations for NP_001253541.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046339
      UniProtKB/TrEMBL
      A0A8J8XGD0, F6XWF8, F7BKF0, G7N3Z1
      Related
      ENSMMUP00000036969.3, ENSMMUT00000043970.3
      Conserved Domains (2) summary
      cd04330
      Location:2 → 81
      RNAP_III_Rpc25_N; Rpc25, N-terminal ribonucleoprotein (RNP) domain. Rpc25 is a subunit of eukaryotic RNA polymerase (RNAP) III and is homologous to Rpa43 of eukaryotic RNAP I, Rpb7 of eukaryotic RNAP II, and RpoE of archaeal RNAP. Rpc25 has two domains, an N-terminal RNP ...
      pfam08292
      Location:83 → 201
      RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      9964772..9981807
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015150399.2 → XP_015005885.1  DNA-directed RNA polymerase III subunit RPC8 isoform X3

      Conserved Domains (2) summary
      cd04330
      Location:2 → 81
      RNAP_III_Rpc25_N; Rpc25, N-terminal ribonucleoprotein (RNP) domain. Rpc25 is a subunit of eukaryotic RNA polymerase (RNAP) III and is homologous to Rpa43 of eukaryotic RNAP I, Rpb7 of eukaryotic RNAP II, and RpoE of archaeal RNAP. Rpc25 has two domains, an N-terminal RNP ...
      pfam08292
      Location:83 → 191
      RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

    2. XM_015150400.2 → XP_015005886.1  DNA-directed RNA polymerase III subunit RPC8 isoform X4

      UniProtKB/TrEMBL
      A0A8J8XGD0, F6XWF8, F7BKF0, G7N3Z1
      Related
      ENSMMUP00000001945.2, ENSMMUT00000002060.4
      Conserved Domains (2) summary
      cd04330
      Location:2 → 81
      RNAP_III_Rpc25_N; Rpc25, N-terminal ribonucleoprotein (RNP) domain. Rpc25 is a subunit of eukaryotic RNA polymerase (RNAP) III and is homologous to Rpa43 of eukaryotic RNAP I, Rpb7 of eukaryotic RNAP II, and RpoE of archaeal RNAP. Rpc25 has two domains, an N-terminal RNP ...
      pfam08292
      Location:83 → 201
      RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

    3. XM_028827306.1 → XP_028683139.1  DNA-directed RNA polymerase III subunit RPC8 isoform X2

      Conserved Domains (2) summary
      pfam08292
      Location:94 → 216
      RNA_pol_Rbc25; RNA polymerase III subunit Rpc25
      cl04309
      Location:77 → 96
      RNAP_Rpb7_N_like; This conserved domain represents the N-terminal ribonucleoprotein (RNP) domain of the Rpb7 subunit of eukaryotic RNA polymerase (RNAP) II and its homologs, Rpa43 of eukaryotic RNAP I, Rpc25 of eukaryotic RNAP III, and RpoE (subunit E) of archaeal RNAP. ...

    4. XM_028827305.1 → XP_028683138.1  DNA-directed RNA polymerase III subunit RPC8 isoform X1

      Conserved Domains (2) summary
      pfam08292
      Location:94 → 206
      RNA_pol_Rbc25; RNA polymerase III subunit Rpc25
      cl04309
      Location:77 → 96
      RNAP_Rpb7_N_like; This conserved domain represents the N-terminal ribonucleoprotein (RNP) domain of the Rpb7 subunit of eukaryotic RNA polymerase (RNAP) II and its homologs, Rpa43 of eukaryotic RNAP I, Rpc25 of eukaryotic RNAP III, and RpoE (subunit E) of archaeal RNAP. ...

    5. XM_028827307.1 → XP_028683140.1  DNA-directed RNA polymerase III subunit RPC8 isoform X2

      Conserved Domains (2) summary
      pfam08292
      Location:94 → 216
      RNA_pol_Rbc25; RNA polymerase III subunit Rpc25
      cl04309
      Location:77 → 96
      RNAP_Rpb7_N_like; This conserved domain represents the N-terminal ribonucleoprotein (RNP) domain of the Rpb7 subunit of eukaryotic RNA polymerase (RNAP) II and its homologs, Rpa43 of eukaryotic RNAP I, Rpc25 of eukaryotic RNAP III, and RpoE (subunit E) of archaeal RNAP. ...
    Nucleotide Protein
    Heading Accession and Version

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