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    GRAMD1C GRAM domain containing 1C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711458, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GRAMD1Cprovided by VGNC
    Official Full Name
    GRAM domain containing 1Cprovided by VGNC
    Primary source
    VGNC:VGNC:73007
    Locus tag
    EGK_11303
    See related
    Ensembl:ENSMMUG00000001943
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GRAMD1C in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (162316139..162430779, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (34868091..34974262)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 191 Neighboring gene zinc finger DHHC-type palmitoyltransferase 23 Neighboring gene 40S ribosomal protein S16-like Neighboring gene vacuolar protein sorting-associated protein 26A pseudogene Neighboring gene 40S ribosomal protein S10 pseudogene Neighboring gene ATPase H+ transporting V1 subunit A Neighboring gene N-alpha-acetyltransferase 50, NatE catalytic subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sterol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sterol transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular sterol transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-plasma membrane contact site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Aster-C
    Names
    GRAM domain-containing protein 1C
    GRAM domain-containing protein 1C-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      162316139..162430779 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844609.1 → XP_028700442.1  protein Aster-C isoform X3

      Conserved Domains (2) summary
      pfam16016
      Location:198 → 345
      DUF4782; Domain of unknown function (DUF4782)
      cl17171
      Location:1 → 42
      PH-like; Pleckstrin homology-like domain

    2. XM_015129889.2 → XP_014985375.1  protein Aster-C isoform X4

      Conserved Domains (1) summary
      pfam16016
      Location:124 → 270
      DUF4782; Domain of unknown function (DUF4782)

    3. XM_028844608.1 → XP_028700441.1  protein Aster-C isoform X2

      Conserved Domains (2) summary
      cd13220
      Location:70 → 163
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam16016
      Location:319 → 466
      DUF4782; Domain of unknown function (DUF4782)

    4. XM_028844605.1 → XP_028700438.1  protein Aster-C isoform X1

      UniProtKB/TrEMBL
      A0A5S6RCU1, A0A8J8YG93, F6TRB7, G7MKC3
      Related
      ENSMMUP00000002599.4, ENSMMUT00000002754.4
      Conserved Domains (2) summary
      cd13220
      Location:80 → 173
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam16016
      Location:329 → 476
      DUF4782; Domain of unknown function (DUF4782)

    5. XM_028844606.1 → XP_028700439.1  protein Aster-C isoform X2

      Conserved Domains (2) summary
      cd13220
      Location:70 → 163
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam16016
      Location:319 → 466
      DUF4782; Domain of unknown function (DUF4782)
    Nucleotide Protein
    Heading Accession and Version

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