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    SPIN3 spindlin family member 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705378, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SPIN3
    Gene description
    spindlin family member 3
    Locus tag
    EGK_20562
    See related
    Ensembl:ENSMMUG00000063849
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    spindlin-3
    Orthologs
    human all
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    Genomic context

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    See SPIN3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (56706651..56727144, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (56469746..56488951, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene ubiquilin 2 Neighboring gene cytochrome b-c1 complex subunit 7 pseudogene Neighboring gene negative regulator of P-body association Neighboring gene peptidyl-prolyl cis-trans isomerase D pseudogene Neighboring gene spindlin-2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gamete generation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spindlin-3
    Names
    Spindlin-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260981.1 → NP_001247910.1  spindlin-3

      See identical proteins and their annotated locations for NP_001247910.1

      Status: PROVISIONAL

      Source sequence(s)
      JU474529
      UniProtKB/TrEMBL
      A0A1D5R2G3, A0A8J8XD24, G7NRK6, H9FQR0
      Related
      ENSMMUP00000066249.1, ENSMMUT00000081389.1
      Conserved Domains (1) summary
      pfam02513
      Location:50 → 98
      Spin-Ssty; Spin/Ssty Family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      56706651..56727144 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127553.2 → XP_014983039.1  spindlin-3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R2G3, A0A8J8XD24, G7NRK6, H9FQR0
      Conserved Domains (1) summary
      pfam02513
      Location:50 → 98
      Spin-Ssty; Spin/Ssty Family

    RNA

    1. XR_003725742.1 RNA Sequence

    2. XR_001441990.2 RNA Sequence

    3. XR_003725740.1 RNA Sequence

    4. XR_001441989.2 RNA Sequence

    5. XR_001441988.2 RNA Sequence

    6. XR_001441991.2 RNA Sequence

    7. XR_003725743.1 RNA Sequence

    8. XR_003725739.1 RNA Sequence

    9. XR_003725741.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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