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    SIDT1 SID1 transmembrane family member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709487, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SIDT1provided by VGNC
    Official Full Name
    SID1 transmembrane family member 1provided by VGNC
    Primary source
    VGNC:VGNC:77312
    See related
    Ensembl:ENSMMUG00000013454
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SIDT1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (162621400..162714294, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (34571467..34661417)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene N-alpha-acetyltransferase 50, NatE catalytic subunit Neighboring gene upstream transcription factor family member 3 Neighboring gene uncharacterized LOC114676429 Neighboring gene microRNA mir-4446 Neighboring gene spindle and centriole associated protein 1 Neighboring gene cilia and flagella associated protein 44 Neighboring gene PHD finger-like domain-containing protein 5A pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SID1 transmembrane family member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      162621400..162714294 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001106443.4 → XP_001106443.1  SID1 transmembrane family member 1 isoform X3

      See identical proteins and their annotated locations for XP_001106443.1

      UniProtKB/TrEMBL
      G7MKB9
      Related
      ENSMMUP00000060512.2, ENSMMUT00000069121.2
      Conserved Domains (1) summary
      pfam13965
      Location:187 → 806
      SID-1_RNA_chan; dsRNA-gated channel SID-1

    2. XM_002802652.3 → XP_002802698.1  SID1 transmembrane family member 1 isoform X2

      See identical proteins and their annotated locations for XP_002802698.1

      UniProtKB/TrEMBL
      F6YGU0, G7MKB9
      Related
      ENSMMUP00000017687.3, ENSMMUT00000018886.4
      Conserved Domains (1) summary
      pfam13965
      Location:187 → 811
      SID-1_RNA_chan; dsRNA-gated channel SID-1

    3. XM_028844613.1 → XP_028700446.1  SID1 transmembrane family member 1 isoform X1

      UniProtKB/TrEMBL
      G7MKB9
      Conserved Domains (1) summary
      pfam13965
      Location:184 → 812
      SID-1_RNA_chan; dsRNA-gated channel SID-1

    4. XM_028844614.1 → XP_028700447.1  SID1 transmembrane family member 1 isoform X4

      Conserved Domains (1) summary
      pfam13965
      Location:2 → 559
      SID-1_RNA_chan; dsRNA-gated channel SID-1

    5. XM_028844615.1 → XP_028700448.1  SID1 transmembrane family member 1 isoform X5

      Conserved Domains (1) summary
      pfam13965
      Location:68 → 630
      SID-1_RNA_chan; dsRNA-gated channel SID-1

    6. XM_028844616.1 → XP_028700449.1  SID1 transmembrane family member 1 isoform X6

      Conserved Domains (1) summary
      pfam13965
      Location:16 → 384
      SID-1_RNA_chan; dsRNA-gated channel SID-1
    Nucleotide Protein
    Heading Accession and Version

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