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    GJC1 gap junction protein gamma 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715463, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GJC1provided by VGNC
    Official Full Name
    gap junction protein gamma 1provided by VGNC
    Primary source
    VGNC:VGNC:73057
    Locus tag
    EGK_08814
    See related
    Ensembl:ENSMMUG00000005458
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    CXNQ
    Orthologs
    human mouse all
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    Genomic context

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    See GJC1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (56071022..56099249, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (50693761..50720014, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene DBF4 zinc finger B Neighboring gene protein DBF4 homolog B pseudogene Neighboring gene ADAM metallopeptidase domain 11 Neighboring gene HIG1 hypoxia inducible domain family member 1B Neighboring gene elongation factor Tu GTP binding domain containing 2 Neighboring gene coiled-coil domain containing 103

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell communication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of connexin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gap junction gamma-1 protein
    Names
    connexin Q
    gap junction protein, delta 3, 31.9kDa
    gap junction protein, gamma 1, 45kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194656.1 → NP_001181585.1  gap junction gamma-1 protein

      See identical proteins and their annotated locations for NP_001181585.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000164
      UniProtKB/TrEMBL
      A0A8J8XV34, F7G5P0, G7NIY8
      Related
      ENSMMUP00000007219.2, ENSMMUT00000007687.4
      Conserved Domains (1) summary
      pfam00029
      Location:2 → 255
      Connexin

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      56071022..56099249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835703.1 → XP_028691536.1  gap junction gamma-1 protein isoform X1

      UniProtKB/TrEMBL
      A0A8J8XV34, F7G5P0, G7NIY8
      Conserved Domains (1) summary
      pfam00029
      Location:2 → 255
      Connexin

    2. XM_028835702.1 → XP_028691535.1  gap junction gamma-1 protein isoform X1

      UniProtKB/TrEMBL
      A0A8J8XV34, F7G5P0, G7NIY8
      Conserved Domains (1) summary
      pfam00029
      Location:2 → 255
      Connexin
    Nucleotide Protein
    Heading Accession and Version

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