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    HYDIN HYDIN axonemal central pair apparatus protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708629, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HYDINprovided by VGNC
    Official Full Name
    HYDIN axonemal central pair apparatus proteinprovided by VGNC
    Primary source
    VGNC:VGNC:99515
    See related
    Ensembl:ENSMMUG00000005805
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HYDIN in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    86
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (60276511..60691795)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (55063603..55242159, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene calbindin 2 Neighboring gene cap methyltransferase 2 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene VAC14 component of PIKFYVE complex

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in axonemal central apparatus assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hydrocephalus-inducing protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      60276511..60691795
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126531.2 → XP_014982017.2  hydrocephalus-inducing protein homolog isoform X1

      UniProtKB/TrEMBL
      F6VSU6
      Related
      ENSMMUP00000007655.4, ENSMMUT00000008140.4
      Conserved Domains (6) summary
      PTZ00121
      Location:2257 → 2463
      PTZ00121; MAEBL; Provisional
      pfam02463
      Location:2260 → 2702
      SMC_N; RecF/RecN/SMC N terminal domain
      pfam17213
      Location:2032 → 2230
      Hydin_ADK; Hydin Adenylate kinase-like domain
      pfam05672
      Location:2270 → 2354
      MAP7; MAP7 (E-MAP-115) family
      pfam15780
      Location:514 → 613
      ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin
      cl27657
      Location:203 → 269
      Motile_Sperm; MSP (Major sperm protein) domain

    2. XM_028841591.1 → XP_028697424.1  hydrocephalus-inducing protein homolog isoform X2

      UniProtKB/TrEMBL
      F6VSU6
      Conserved Domains (5) summary
      PTZ00121
      Location:2249 → 2619
      PTZ00121; MAEBL; Provisional
      pfam17213
      Location:2032 → 2230
      Hydin_ADK; Hydin Adenylate kinase-like domain
      pfam05672
      Location:2270 → 2354
      MAP7; MAP7 (E-MAP-115) family
      pfam15780
      Location:514 → 613
      ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin
      cl27657
      Location:203 → 269
      Motile_Sperm; MSP (Major sperm protein) domain
    Nucleotide Protein
    Heading Accession and Version

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