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    HOMER1 homer scaffold protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709774, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HOMER1provided by VGNC
    Official Full Name
    homer scaffold protein 1provided by VGNC
    Primary source
    VGNC:VGNC:73405
    See related
    Ensembl:ENSMMUG00000017057
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HOMER1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (76183530..76348444, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (76093985..76229867, complement)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene junction mediating and regulatory protein, p53 cofactor Neighboring gene 60S acidic ribosomal protein P1 pseudogene Neighboring gene methionine adenosyltransferase 2 subunit beta pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L29-like Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene terminal nucleotidyltransferase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled glutamate receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled glutamate receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of store-operated calcium entry IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homer protein homolog 1
    Names
    homer homolog 1
    homer scaffolding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261570.1 → NP_001248499.1  homer protein homolog 1

      See identical proteins and their annotated locations for NP_001248499.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044621
      UniProtKB/TrEMBL
      A0A1D5R084, A0A1D5R1S2, H9EPI5
      Related
      ENSMMUP00000053717.2, ENSMMUT00000053494.2
      Conserved Domains (2) summary
      COG1196
      Location:184 → 352
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01206
      Location:3 → 111
      EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      76183530..76348444 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849245.1 → XP_028705078.1  homer protein homolog 1 isoform X1

      Conserved Domains (1) summary
      cd01206
      Location:3 → 111
      EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain

    RNA

    1. XR_003730106.1 RNA Sequence

    2. XR_003730104.1 RNA Sequence

    3. XR_003730105.1 RNA Sequence

    4. XR_003730107.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials