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    CCNF cyclin F [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696745, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCNFprovided by VGNC
    Official Full Name
    cyclin Fprovided by VGNC
    Primary source
    VGNC:VGNC:70729
    See related
    Ensembl:ENSMMUG00000000001
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    cyclin-F
    Orthologs
    human mouse all
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    Genomic context

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    See CCNF in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (2458498..2491107)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (2454451..2486455)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily A member 3 Neighboring gene translation initiation factor IF-2-like Neighboring gene ATP-binding cassette sub-family A member 17-like Neighboring gene uncharacterized LOC114674462 Neighboring gene 60S ribosomal protein L39 pseudogene Neighboring gene tubulin epsilon and delta complex 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic cell cycle phase transition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cyclin-dependent protein kinase holoenzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-F

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265915.1 → NP_001252844.1  cyclin-F

      See identical proteins and their annotated locations for NP_001252844.1

      Status: PROVISIONAL

      Source sequence(s)
      JU471720
      UniProtKB/TrEMBL
      A0A5F8AQ33, H9YXV8
      Related
      ENSMMUP00000080054.1, ENSMMUT00000082915.1
      Conserved Domains (5) summary
      smart00256
      Location:35 → 73
      FBOX; A Receptor for Ubiquitination Targets
      COG0790
      Location:88 → 146
      TPR; TPR repeat [Signal transduction mechanisms]
      sd00010
      Location:88 → 112
      SLR; SLR repeat [structural motif]
      pfam00134
      Location:281 → 406
      Cyclin_N; Cyclin, N-terminal domain
      pfam02984
      Location:421 → 526
      Cyclin_C; Cyclin, C-terminal domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      2458498..2491107
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840395.1 → XP_028696228.1  cyclin-F isoform X1

      Conserved Domains (2) summary
      COG5024
      Location:1 → 219
      COG5024; Cyclin [Cell division and chromosome partitioning]
      pfam00134
      Location:1 → 98
      Cyclin_N; Cyclin, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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