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    USP39 ubiquitin specific peptidase 39 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696217, updated on 17-Aug-2024

    Summary

    Official Symbol
    USP39provided by VGNC
    Official Full Name
    ubiquitin specific peptidase 39provided by VGNC
    Primary source
    VGNC:VGNC:79227
    See related
    Ensembl:ENSMMUG00000017820
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See USP39 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (22826696..22874748, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (87355199..87403014)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene probable G-protein coupled receptor 160 Neighboring gene surfactant protein B Neighboring gene chromosome 13 C2orf68 homolog Neighboring gene transmembrane protein 150A Neighboring gene ring finger protein 181 Neighboring gene vesicle associated membrane protein 5

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in spliceosomal complex assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    ubiquitin carboxyl-terminal hydrolase 39; U4/U6.U5 tri-snRNP-associated protein 2
    NP_001248624.1
    XP_014968230.1
    XP_014968231.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261695.1NP_001248624.1  ubiquitin carboxyl-terminal hydrolase 39

      See identical proteins and their annotated locations for NP_001248624.1

      Status: PROVISIONAL

      Source sequence(s)
      JU474050
      UniProtKB/TrEMBL
      G7NAJ2, H9FNX9
      Related
      ENSMMUP00000036380.2, ENSMMUT00000043381.3
      Conserved Domains (2) summary
      cd02669
      Location:106553
      Peptidase_C19M; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
      pfam00443
      Location:224552
      UCH; Ubiquitin carboxyl-terminal hydrolase

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      22826696..22874748 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112745.2XP_014968231.1  U4/U6.U5 tri-snRNP-associated protein 2 isoform X2

      Conserved Domains (1) summary
      cl02553
      Location:1284
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    2. XM_015112744.2XP_014968230.1  U4/U6.U5 tri-snRNP-associated protein 2 isoform X1

      UniProtKB/TrEMBL
      G7NAJ2
      Conserved Domains (2) summary
      cd02669
      Location:106521
      Peptidase_C19M; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
      pfam00443
      Location:224531
      UCH; Ubiquitin carboxyl-terminal hydrolase