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    COX11 cytochrome c oxidase copper chaperone COX11 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 641445, updated on 17-Aug-2024

    Summary

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    Official Symbol
    COX11provided by VGNC
    Official Full Name
    cytochrome c oxidase copper chaperone COX11provided by VGNC
    Primary source
    VGNC:VGNC:81377
    Locus tag
    EGK_08546
    See related
    Ensembl:ENSMMUG00000010548
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See COX11 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (41811677..41862649)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (34714533..34760968)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672995 Neighboring gene syntaxin binding protein 4 Neighboring gene uncharacterized LOC114673126 Neighboring gene uncharacterized LOC106993991 Neighboring gene target of myb1 like 1 membrane trafficking protein Neighboring gene uncharacterized LOC106993993 Neighboring gene ADP-ribosylation factor-like protein 2-binding protein pseudogene Neighboring gene myosin regulatory light chain 12B pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
    2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    COX11 homolog, cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein COX11, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195440.1 → NP_001182369.1  cytochrome c oxidase assembly protein COX11, mitochondrial

      See identical proteins and their annotated locations for NP_001182369.1

      Status: VALIDATED

      Source sequence(s)
      AY680459, CB309264
      UniProtKB/TrEMBL
      A0A5K1UN85, A0A8J8XE01, F7D0G7, G7NHP1, H9FQ24
      Related
      ENSMMUP00000013827.4, ENSMMUT00000014759.4
      Conserved Domains (1) summary
      PTZ00128
      Location:62 → 265
      PTZ00128; cytochrome c oxidase assembly protein-like; Provisional

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      41811677..41862649
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015119209.2 → XP_014974695.2  COX11 homolog, cytochrome c oxidase assembly protein isoform X1

      UniProtKB/TrEMBL
      A0A5K1UN85
      Conserved Domains (1) summary
      cl01240
      Location:62 → 216
      CtaG_Cox11; Cytochrome c oxidase assembly protein CtaG/Cox11

    RNA

    1. XR_001440373.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials