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    PTPMT1 protein tyrosine phosphatase mitochondrial 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713104, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PTPMT1provided by VGNC
    Official Full Name
    protein tyrosine phosphatase mitochondrial 1provided by VGNC
    Primary source
    VGNC:VGNC:110527
    See related
    Ensembl:ENSMMUG00000004286
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PTPMT1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (18181884..18191111, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (18437928..18445387, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene NADH:ubiquinone oxidoreductase core subunit S3 Neighboring gene kelch repeat and BTB domain containing 4 Neighboring gene CUGBP Elav-like family member 1 Neighboring gene receptor associated protein of the synapse

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylglycerophosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1
    NP_001252732.1
    XP_014969674.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265803.1 → NP_001252732.1  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1

      See identical proteins and their annotated locations for NP_001252732.1

      Status: PROVISIONAL

      Source sequence(s)
      JV667338
      UniProtKB/TrEMBL
      F6ZLY2, G7NDF4
      Related
      ENSMMUP00000005737.1, ENSMMUT00000006094.3
      Conserved Domains (1) summary
      cl21483
      Location:40 → 182
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      18181884..18191111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114188.2 → XP_014969674.1  phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZV1
      Related
      ENSMMUP00000070167.1, ENSMMUT00000101320.1
      Conserved Domains (1) summary
      cl28904
      Location:37 → 121
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    RNA

    1. XR_003722313.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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