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    ISG20 interferon stimulated exonuclease gene 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698376, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ISG20provided by VGNC
    Official Full Name
    interferon stimulated exonuclease gene 20provided by VGNC
    Primary source
    VGNC:VGNC:73769
    Locus tag
    EGK_17807
    See related
    Ensembl:ENSMMUG00000007669
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ISG20 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (67388764..67405372)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (66619503..66645277)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-1179 Neighboring gene microRNA mir-7-2 Neighboring gene apoptosis enhancing nuclease Neighboring gene aggrecan Neighboring gene hyaluronan and proteoglycan link protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in RNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response to virus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of viral genome replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interferon-stimulated gene 20 kDa protein
    NP_001244982.1
    XP_014998429.1
    XP_028706074.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258053.1 → NP_001244982.1  interferon-stimulated gene 20 kDa protein

      See identical proteins and their annotated locations for NP_001244982.1

      Status: PROVISIONAL

      Source sequence(s)
      JU473329
      UniProtKB/TrEMBL
      A0A8J8Y1M6, F7D5S9, G7MYR7
      Related
      ENSMMUP00000074907.1, ENSMMUT00000080625.1
      Conserved Domains (2) summary
      COG0847
      Location:39 → 162
      DnaQ; DNA polymerase III, epsilon subunit or related 3'-5' exonuclease [Replication, recombination and repair]
      cl10012
      Location:8 → 163
      DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      67388764..67405372
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850241.1 → XP_028706074.1  interferon-stimulated gene 20 kDa protein isoform X2

      Conserved Domains (1) summary
      cl10012
      Location:8 → 143
      DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily

    2. XM_015142943.2 → XP_014998429.1  interferon-stimulated gene 20 kDa protein isoform X1

      Conserved Domains (1) summary
      cl10012
      Location:8 → 143
      DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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